Gene : Glyma.06G174600 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR11669:SF3 - PROTEIN STICHEL-LIKE 2 Genomic Order:  1746
Name:  ? Glyma.06G174600 Secondary Identifier:  ? PAC:30549474
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G174600 0.5kb upstream 0.5kb upstream 5655 true Chr06: 14743094-14748748 Glycine max
Glyma.06G174600 0.5kb upstream 0.5kb upstream 500 false Chr06: 14748249-14748748 Glycine max
Glyma.06G174600 0.5kb downstream 0.5kb downstream 5655 true Chr06: 14742594-14748248 Glycine max
Glyma.06G174600 0.5kb downstream 0.5kb downstream 500 false Chr06: 14742594-14743093 Glycine max
Glyma.06G174600 1.0kb upstream 1.0kb upstream 6155 true Chr06: 14743094-14749248 Glycine max
Glyma.06G174600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14748249-14749248 Glycine max
Glyma.06G174600 1.0kb downstream 1.0kb downstream 6155 true Chr06: 14742094-14748248 Glycine max
Glyma.06G174600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14742094-14743093 Glycine max
Glyma.06G174600 2.0kb upstream 2.0kb upstream 7155 true Chr06: 14743094-14750248 Glycine max
Glyma.06G174600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14748249-14750248 Glycine max
Glyma.06G174600 2.0kb downstream 2.0kb downstream 7155 true Chr06: 14741094-14748248 Glycine max
Glyma.06G174600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14741094-14743093 Glycine max
Glyma.06G174600 5.0kb upstream 5.0kb upstream 10155 true Chr06: 14743094-14753248 Glycine max
Glyma.06G174600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14748249-14753248 Glycine max
Glyma.06G174600 5.0kb downstream 5.0kb downstream 10155 true Chr06: 14738094-14748248 Glycine max
Glyma.06G174600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14738094-14743093 Glycine max
Glyma.06G174600 10.0kb upstream 10.0kb upstream 15155 true Chr06: 14743094-14758248 Glycine max
Glyma.06G174600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14748249-14758248 Glycine max
Glyma.06G174600 10.0kb downstream 10.0kb downstream 15155 true Chr06: 14733094-14748248 Glycine max
Glyma.06G174600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14733094-14743093 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311123 5265 Fabidae View MSA
124063569 5270 Rosid View MSA
123738968 5271 Pentapetalae View MSA
122794041 5272 Eudicot View MSA
122048856 5273 Angiosperm View MSA
121350538 5274 Embryophyte View MSA
123381780 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0650815 0.0 0.256488 Low Low
cufflinks 1.59156 0.0 4.96404   High
cufflinks 0.410007 0.0 2.46895    
cufflinks 0.538097 0.0 3.10491    
cufflinks 0.501701 0.0 3.04491    
cufflinks 0.510915 0.0 2.22048    
cufflinks 0.415098 0.0 2.56816    
cufflinks 0.0350749 0.0 0.141201 Low Low
cufflinks 1.15831 0.0 5.23562    
cufflinks 0.026     Low  
cufflinks 0.022     Low  
cufflinks 0.276        
cufflinks 0.278        
cufflinks 0.468        
cufflinks 0.026     Low  
cufflinks 0.428        
cufflinks 0.013     Low Low
cufflinks 0.444        
cufflinks 0.852       High
cufflinks 0.336        
cufflinks 0.006     Low Low
cufflinks 0.384        
cufflinks 1.015       High
cufflinks 0.012     Low Low
cufflinks 0.403        
cufflinks 0.053     Low  

0 Strain