Gene : Glyma.06G175100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR27000:SF9 - LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE/TYROSINE-PROTEIN KINASE SOBIR1 Genomic Order:  1751
Name:  ? Glyma.06G175100 Secondary Identifier:  ? PAC:30553953
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G175100 0.5kb upstream 0.5kb upstream 2816 true Chr06: 14817156-14819971 Glycine max
Glyma.06G175100 0.5kb upstream 0.5kb upstream 500 false Chr06: 14819472-14819971 Glycine max
Glyma.06G175100 0.5kb downstream 0.5kb downstream 2816 true Chr06: 14816656-14819471 Glycine max
Glyma.06G175100 0.5kb downstream 0.5kb downstream 500 false Chr06: 14816656-14817155 Glycine max
Glyma.06G175100 1.0kb upstream 1.0kb upstream 3316 true Chr06: 14817156-14820471 Glycine max
Glyma.06G175100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14819472-14820471 Glycine max
Glyma.06G175100 1.0kb downstream 1.0kb downstream 3316 true Chr06: 14816156-14819471 Glycine max
Glyma.06G175100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14816156-14817155 Glycine max
Glyma.06G175100 2.0kb upstream 2.0kb upstream 4316 true Chr06: 14817156-14821471 Glycine max
Glyma.06G175100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14819472-14821471 Glycine max
Glyma.06G175100 2.0kb downstream 2.0kb downstream 4316 true Chr06: 14815156-14819471 Glycine max
Glyma.06G175100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14815156-14817155 Glycine max
Glyma.06G175100 5.0kb upstream 5.0kb upstream 7316 true Chr06: 14817156-14824471 Glycine max
Glyma.06G175100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14819472-14824471 Glycine max
Glyma.06G175100 5.0kb downstream 5.0kb downstream 7316 true Chr06: 14812156-14819471 Glycine max
Glyma.06G175100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14812156-14817155 Glycine max
Glyma.06G175100 10.0kb upstream 10.0kb upstream 12316 true Chr06: 14817156-14829471 Glycine max
Glyma.06G175100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14819472-14829471 Glycine max
Glyma.06G175100 10.0kb downstream 10.0kb downstream 12316 true Chr06: 14807156-14819471 Glycine max
Glyma.06G175100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14807156-14817155 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303317 5265 Fabidae View MSA
124066078 5270 Rosid View MSA
123748956 5271 Pentapetalae View MSA
122785949 5272 Eudicot View MSA
122046333 5273 Angiosperm View MSA
121347860 5274 Embryophyte View MSA
123380655 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.6882 0.0 120.382 High High
cufflinks 1.5741 0.0 5.0995    
cufflinks 5.67353 0.0 15.6428    
cufflinks 2.29291 0.0 7.02499    
cufflinks 3.41093 0.0 9.87113    
cufflinks 4.21113 0.0 11.9138    
cufflinks 0.0740297 0.0 0.292329 Low Low
cufflinks 2.72662 0.0 8.13652    
cufflinks 1.34938 0.0 4.44778    
cufflinks 22.019     High High
cufflinks 9.74     High  
cufflinks 13.347     High  
cufflinks 5.663        
cufflinks 0.464       Low
cufflinks 3.904        
cufflinks 18.536     High  
cufflinks 25.726     High High
cufflinks 7.688     High  
cufflinks 5.24        
cufflinks 10.807     High  
cufflinks 5.256        
cufflinks 17.031     High  
cufflinks 15.027     High  
cufflinks 8.757     High  
cufflinks 9.463     High  
cufflinks 7.583     High  

0 Strain