Gene : Glyma.06G175400 G. max Wm82.a2.v1
Defline:  (1 of 43) KOG0131 - Splicing factor 3b, subunit 4 Genomic Order:  1754
Name:  ? Glyma.06G175400 Secondary Identifier:  ? PAC:30550353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G175400 0.5kb upstream 0.5kb upstream 3265 true Chr06: 14841592-14844856 Glycine max
Glyma.06G175400 0.5kb upstream 0.5kb upstream 500 false Chr06: 14844357-14844856 Glycine max
Glyma.06G175400 0.5kb downstream 0.5kb downstream 3265 true Chr06: 14841092-14844356 Glycine max
Glyma.06G175400 0.5kb downstream 0.5kb downstream 500 false Chr06: 14841092-14841591 Glycine max
Glyma.06G175400 1.0kb upstream 1.0kb upstream 3765 true Chr06: 14841592-14845356 Glycine max
Glyma.06G175400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14844357-14845356 Glycine max
Glyma.06G175400 1.0kb downstream 1.0kb downstream 3765 true Chr06: 14840592-14844356 Glycine max
Glyma.06G175400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14840592-14841591 Glycine max
Glyma.06G175400 2.0kb upstream 2.0kb upstream 4765 true Chr06: 14841592-14846356 Glycine max
Glyma.06G175400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14844357-14846356 Glycine max
Glyma.06G175400 2.0kb downstream 2.0kb downstream 4765 true Chr06: 14839592-14844356 Glycine max
Glyma.06G175400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14839592-14841591 Glycine max
Glyma.06G175400 5.0kb upstream 5.0kb upstream 7765 true Chr06: 14841592-14849356 Glycine max
Glyma.06G175400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14844357-14849356 Glycine max
Glyma.06G175400 5.0kb downstream 5.0kb downstream 7765 true Chr06: 14836592-14844356 Glycine max
Glyma.06G175400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14836592-14841591 Glycine max
Glyma.06G175400 10.0kb upstream 10.0kb upstream 12765 true Chr06: 14841592-14854356 Glycine max
Glyma.06G175400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14844357-14854356 Glycine max
Glyma.06G175400 10.0kb downstream 10.0kb downstream 12765 true Chr06: 14831592-14844356 Glycine max
Glyma.06G175400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14831592-14841591 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311662 5265 Fabidae View MSA
124073002 5270 Rosid View MSA
123747230 5271 Pentapetalae View MSA
122795057 5272 Eudicot View MSA
122047062 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121349812 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 122.024 0.0 374.088 High High
cufflinks 54.3343 0.0 149.813 High  
cufflinks 28.1708 0.0 75.1862 High  
cufflinks 31.5623 0.0 84.4455 High  
cufflinks 23.117 0.0 61.6775 High  
cufflinks 9.87116 0.0 27.4334   Low
cufflinks 25.9863 0.0 69.3371 High  
cufflinks 36.132 0.0 97.1586 High  
cufflinks 16.7223 0.0 44.9297    
cufflinks 11.625     High  
cufflinks 0.529       Low
cufflinks 13.784     High  
cufflinks 7.373     High  
cufflinks 9.353     High  
cufflinks 1.992        
cufflinks 71.066     High High
cufflinks 1.865        
cufflinks 13.617     High  
cufflinks 24.622     High  
cufflinks 96.419     High High
cufflinks 0.861       Low
cufflinks 81.753     High High
cufflinks 85.168     High High
cufflinks 0.63       Low
cufflinks 79.569     High High
cufflinks 1.064       Low

0 Strain