Gene : Glyma.06G176300 G. max Wm82.a2.v1
Defline:  (1 of 2) KOG2490 - Predicted membrane protein Genomic Order:  1763
Name:  ? Glyma.06G176300 Secondary Identifier:  ? PAC:30550661
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G176300 0.5kb upstream 0.5kb upstream 9043 true Chr06: 14910204-14919246 Glycine max
Glyma.06G176300 0.5kb upstream 0.5kb upstream 500 false Chr06: 14918747-14919246 Glycine max
Glyma.06G176300 0.5kb downstream 0.5kb downstream 9043 true Chr06: 14909704-14918746 Glycine max
Glyma.06G176300 0.5kb downstream 0.5kb downstream 500 false Chr06: 14909704-14910203 Glycine max
Glyma.06G176300 1.0kb upstream 1.0kb upstream 9543 true Chr06: 14910204-14919746 Glycine max
Glyma.06G176300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14918747-14919746 Glycine max
Glyma.06G176300 1.0kb downstream 1.0kb downstream 9543 true Chr06: 14909204-14918746 Glycine max
Glyma.06G176300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14909204-14910203 Glycine max
Glyma.06G176300 2.0kb upstream 2.0kb upstream 10543 true Chr06: 14910204-14920746 Glycine max
Glyma.06G176300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14918747-14920746 Glycine max
Glyma.06G176300 2.0kb downstream 2.0kb downstream 10543 true Chr06: 14908204-14918746 Glycine max
Glyma.06G176300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14908204-14910203 Glycine max
Glyma.06G176300 5.0kb upstream 5.0kb upstream 13543 true Chr06: 14910204-14923746 Glycine max
Glyma.06G176300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14918747-14923746 Glycine max
Glyma.06G176300 5.0kb downstream 5.0kb downstream 13543 true Chr06: 14905204-14918746 Glycine max
Glyma.06G176300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14905204-14910203 Glycine max
Glyma.06G176300 10.0kb upstream 10.0kb upstream 18543 true Chr06: 14910204-14928746 Glycine max
Glyma.06G176300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14918747-14928746 Glycine max
Glyma.06G176300 10.0kb downstream 10.0kb downstream 18543 true Chr06: 14900204-14918746 Glycine max
Glyma.06G176300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14900204-14910203 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122303806 5265 Fabidae View MSA
124068182 5270 Rosid View MSA
123752415 5271 Pentapetalae View MSA
122788398 5272 Eudicot View MSA
122042110 5273 Angiosperm View MSA
121347997 5274 Embryophyte View MSA
123426226 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.36524 0.0 13.069    
cufflinks 2.11998 0.0 9.73331   Low
cufflinks 9.15505 0.0 33.1244   High
cufflinks 4.52025 0.0 18.5352    
cufflinks 3.89752 0.0 16.505    
cufflinks 3.52935 0.0 13.3788    
cufflinks 3.4829 0.0 15.2622    
cufflinks 4.63677 0.0 18.8492    
cufflinks 3.72345 0.0 15.8993    
cufflinks 0.401        
cufflinks 0.913       High
cufflinks 0.794       High
cufflinks 0.35        
cufflinks 0.439        
cufflinks 0.718       High
cufflinks 0.234        
cufflinks 0.319        
cufflinks 0.469        
cufflinks 0.269        
cufflinks 0.215       Low
cufflinks 0.871       High
cufflinks 0.246        
cufflinks 0.195       Low
cufflinks 0.813       High
cufflinks 0.217       Low
cufflinks 0.331        

0 Strain