Gene : Glyma.06G176900 G. max Wm82.a2.v1
Defline:  (1 of 5) PTHR23115//PTHR23115:SF146 - TRANSLATION FACTOR Genomic Order:  1769
Name:  ? Glyma.06G176900 Secondary Identifier:  ? PAC:30551212
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G176900 0.5kb upstream 0.5kb upstream 2554 true Chr06: 14973082-14975635 Glycine max
Glyma.06G176900 0.5kb upstream 0.5kb upstream 500 false Chr06: 14973082-14973581 Glycine max
Glyma.06G176900 0.5kb downstream 0.5kb downstream 2554 true Chr06: 14973582-14976135 Glycine max
Glyma.06G176900 0.5kb downstream 0.5kb downstream 500 false Chr06: 14975636-14976135 Glycine max
Glyma.06G176900 1.0kb upstream 1.0kb upstream 3054 true Chr06: 14972582-14975635 Glycine max
Glyma.06G176900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14972582-14973581 Glycine max
Glyma.06G176900 1.0kb downstream 1.0kb downstream 3054 true Chr06: 14973582-14976635 Glycine max
Glyma.06G176900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14975636-14976635 Glycine max
Glyma.06G176900 2.0kb upstream 2.0kb upstream 4054 true Chr06: 14971582-14975635 Glycine max
Glyma.06G176900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14971582-14973581 Glycine max
Glyma.06G176900 2.0kb downstream 2.0kb downstream 4054 true Chr06: 14973582-14977635 Glycine max
Glyma.06G176900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14975636-14977635 Glycine max
Glyma.06G176900 5.0kb upstream 5.0kb upstream 7054 true Chr06: 14968582-14975635 Glycine max
Glyma.06G176900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14968582-14973581 Glycine max
Glyma.06G176900 5.0kb downstream 5.0kb downstream 7054 true Chr06: 14973582-14980635 Glycine max
Glyma.06G176900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14975636-14980635 Glycine max
Glyma.06G176900 10.0kb upstream 10.0kb upstream 12054 true Chr06: 14963582-14975635 Glycine max
Glyma.06G176900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14963582-14973581 Glycine max
Glyma.06G176900 10.0kb downstream 10.0kb downstream 12054 true Chr06: 14973582-14985635 Glycine max
Glyma.06G176900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14975636-14985635 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122307282 5265 Fabidae View MSA
124072746 5270 Rosid View MSA
123742127 5271 Pentapetalae View MSA
122793588 5272 Eudicot View MSA
122044258 5273 Angiosperm View MSA
121344643 5274 Embryophyte View MSA
123380078 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 127.199 0.0 421.853 High High
cufflinks 18.258 0.0 48.7122    
cufflinks 4.22097 0.0 12.5431    
cufflinks 6.61263 0.0 18.5159    
cufflinks 3.74715 0.0 11.1212    
cufflinks 1.97528 0.0 6.45038   Low
cufflinks 9.39783 0.0 25.4865    
cufflinks 7.29713 0.0 20.2007    
cufflinks 1.74028 0.0 5.78472   Low
cufflinks 5.198        
cufflinks 0.123       Low
cufflinks 3.319        
cufflinks 0.739        
cufflinks 0.446        
cufflinks 0.447        
cufflinks 66.314     High High
cufflinks 0.29        
cufflinks 3.176        
cufflinks 13.925     High  
cufflinks 71.498     High High
cufflinks 0.108       Low
cufflinks 60.779     High High
cufflinks 53.644     High High
cufflinks 0.222       Low
cufflinks 68.127     High High
cufflinks 0.325        

0 Strain