Gene : Glyma.06G177800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10774//PTHR10774:SF94 - EXTENDED SYNAPTOTAGMIN-RELATED Genomic Order:  1778
Name:  ? Glyma.06G177800 Secondary Identifier:  ? PAC:30552298
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G177800 0.5kb upstream 0.5kb upstream 5689 true Chr06: 15050361-15056049 Glycine max
Glyma.06G177800 0.5kb upstream 0.5kb upstream 500 false Chr06: 15055550-15056049 Glycine max
Glyma.06G177800 0.5kb downstream 0.5kb downstream 5689 true Chr06: 15049861-15055549 Glycine max
Glyma.06G177800 0.5kb downstream 0.5kb downstream 500 false Chr06: 15049861-15050360 Glycine max
Glyma.06G177800 1.0kb upstream 1.0kb upstream 6189 true Chr06: 15050361-15056549 Glycine max
Glyma.06G177800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15055550-15056549 Glycine max
Glyma.06G177800 1.0kb downstream 1.0kb downstream 6189 true Chr06: 15049361-15055549 Glycine max
Glyma.06G177800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15049361-15050360 Glycine max
Glyma.06G177800 2.0kb upstream 2.0kb upstream 7189 true Chr06: 15050361-15057549 Glycine max
Glyma.06G177800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15055550-15057549 Glycine max
Glyma.06G177800 2.0kb downstream 2.0kb downstream 7189 true Chr06: 15048361-15055549 Glycine max
Glyma.06G177800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15048361-15050360 Glycine max
Glyma.06G177800 5.0kb upstream 5.0kb upstream 10189 true Chr06: 15050361-15060549 Glycine max
Glyma.06G177800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15055550-15060549 Glycine max
Glyma.06G177800 5.0kb downstream 5.0kb downstream 10189 true Chr06: 15045361-15055549 Glycine max
Glyma.06G177800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15045361-15050360 Glycine max
Glyma.06G177800 10.0kb upstream 10.0kb upstream 15189 true Chr06: 15050361-15065549 Glycine max
Glyma.06G177800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15055550-15065549 Glycine max
Glyma.06G177800 10.0kb downstream 10.0kb downstream 15189 true Chr06: 15040361-15055549 Glycine max
Glyma.06G177800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15040361-15050360 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300361 5265 Fabidae View MSA
124064213 5270 Rosid View MSA
123738641 5271 Pentapetalae View MSA
122790739 5272 Eudicot View MSA
122048530 5273 Angiosperm View MSA
121350183 5274 Embryophyte View MSA
123381609 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.148581 0.0 0.749256 Low  
cufflinks 0.183853 0.0 0.900247 Low  
cufflinks 8.56698 0.0 29.2217   High
cufflinks 0.264278 0.0 1.2284    
cufflinks 0.239969 0.0 1.4993    
cufflinks 0.658621 0.0 2.63303    
cufflinks 2.51729 0.0 8.93753   High
cufflinks 0.0874236 0.0 0.425729 Low Low
cufflinks 0.142008 0.0 0.709617 Low  
cufflinks 0.073     Low  
cufflinks 0.259        
cufflinks 2.528       High
cufflinks 0.243        
cufflinks 0.129        
cufflinks 0.048     Low  
cufflinks 0.125        
cufflinks 0.019     Low Low
cufflinks 0.515       High
cufflinks 0.071     Low  
cufflinks 0.04     Low  
cufflinks 0.108        
cufflinks 0.061     Low  
cufflinks 0.059     Low  
cufflinks 0.162        
cufflinks 0.119        
cufflinks 0.069        

0 Strain