Gene : Glyma.06G178300 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR11721 - 60S RIBOSOMAL PROTEIN L27A Genomic Order:  1783
Name:  ? Glyma.06G178300 Secondary Identifier:  ? PAC:30552551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G178300 0.5kb upstream 0.5kb upstream 1860 true Chr06: 15094415-15096274 Glycine max
Glyma.06G178300 0.5kb upstream 0.5kb upstream 500 false Chr06: 15094415-15094914 Glycine max
Glyma.06G178300 0.5kb downstream 0.5kb downstream 1860 true Chr06: 15094915-15096774 Glycine max
Glyma.06G178300 0.5kb downstream 0.5kb downstream 500 false Chr06: 15096275-15096774 Glycine max
Glyma.06G178300 1.0kb upstream 1.0kb upstream 2360 true Chr06: 15093915-15096274 Glycine max
Glyma.06G178300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 15093915-15094914 Glycine max
Glyma.06G178300 1.0kb downstream 1.0kb downstream 2360 true Chr06: 15094915-15097274 Glycine max
Glyma.06G178300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 15096275-15097274 Glycine max
Glyma.06G178300 2.0kb upstream 2.0kb upstream 3360 true Chr06: 15092915-15096274 Glycine max
Glyma.06G178300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 15092915-15094914 Glycine max
Glyma.06G178300 2.0kb downstream 2.0kb downstream 3360 true Chr06: 15094915-15098274 Glycine max
Glyma.06G178300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 15096275-15098274 Glycine max
Glyma.06G178300 5.0kb upstream 5.0kb upstream 6360 true Chr06: 15089915-15096274 Glycine max
Glyma.06G178300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 15089915-15094914 Glycine max
Glyma.06G178300 5.0kb downstream 5.0kb downstream 6360 true Chr06: 15094915-15101274 Glycine max
Glyma.06G178300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 15096275-15101274 Glycine max
Glyma.06G178300 10.0kb upstream 10.0kb upstream 11360 true Chr06: 15084915-15096274 Glycine max
Glyma.06G178300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 15084915-15094914 Glycine max
Glyma.06G178300 10.0kb downstream 10.0kb downstream 11360 true Chr06: 15094915-15106274 Glycine max
Glyma.06G178300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 15096275-15106274 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313836 5265 Fabidae View MSA
124061356 5270 Rosid View MSA
123746209 5271 Pentapetalae View MSA
122794134 5272 Eudicot View MSA
122049114 5273 Angiosperm View MSA
121346652 5274 Embryophyte View MSA
123426087 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.0703 0.0 91.332 High  
cufflinks 39.7269 0.0 107.222 High  
cufflinks 14.4177 0.0 39.0593   Low
cufflinks 24.7165 0.0 65.9404 High  
cufflinks 98.1349 0.0 290.825 High High
cufflinks 64.6433 0.0 181.28 High  
cufflinks 69.6195 0.0 196.94 High  
cufflinks 38.2517 0.0 103.064 High  
cufflinks 49.2588 0.0 134.812 High  
cufflinks 24.211     High  
cufflinks 8.769     High Low
cufflinks 21.606     High  
cufflinks 106.521     High High
cufflinks 158.149     High High
cufflinks 9.457     High  
cufflinks 15.995     High  
cufflinks 18.516     High  
cufflinks 24.038     High  
cufflinks 40.189     High  
cufflinks 8.908     High Low
cufflinks 14.643     High  
cufflinks 11.607     High  
cufflinks 28.183     High  
cufflinks 9.574     High  
cufflinks 11.164     High  
cufflinks 20.015     High  

0 Strain