Gene : Glyma.06G167900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12300//PTHR12300:SF58 - HVA22-LIKE PROTEINS Genomic Order:  1679
Name:  ? Glyma.06G167900 Secondary Identifier:  ? PAC:30552716
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G167900 0.5kb upstream 0.5kb upstream 2802 true Chr06: 14014876-14017677 Glycine max
Glyma.06G167900 0.5kb upstream 0.5kb upstream 500 false Chr06: 14017178-14017677 Glycine max
Glyma.06G167900 0.5kb downstream 0.5kb downstream 2802 true Chr06: 14014376-14017177 Glycine max
Glyma.06G167900 0.5kb downstream 0.5kb downstream 500 false Chr06: 14014376-14014875 Glycine max
Glyma.06G167900 1.0kb upstream 1.0kb upstream 3302 true Chr06: 14014876-14018177 Glycine max
Glyma.06G167900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14017178-14018177 Glycine max
Glyma.06G167900 1.0kb downstream 1.0kb downstream 3302 true Chr06: 14013876-14017177 Glycine max
Glyma.06G167900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14013876-14014875 Glycine max
Glyma.06G167900 2.0kb upstream 2.0kb upstream 4302 true Chr06: 14014876-14019177 Glycine max
Glyma.06G167900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14017178-14019177 Glycine max
Glyma.06G167900 2.0kb downstream 2.0kb downstream 4302 true Chr06: 14012876-14017177 Glycine max
Glyma.06G167900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14012876-14014875 Glycine max
Glyma.06G167900 5.0kb upstream 5.0kb upstream 7302 true Chr06: 14014876-14022177 Glycine max
Glyma.06G167900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14017178-14022177 Glycine max
Glyma.06G167900 5.0kb downstream 5.0kb downstream 7302 true Chr06: 14009876-14017177 Glycine max
Glyma.06G167900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14009876-14014875 Glycine max
Glyma.06G167900 10.0kb upstream 10.0kb upstream 12302 true Chr06: 14014876-14027177 Glycine max
Glyma.06G167900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14017178-14027177 Glycine max
Glyma.06G167900 10.0kb downstream 10.0kb downstream 12302 true Chr06: 14004876-14017177 Glycine max
Glyma.06G167900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14004876-14014875 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312000 5265 Fabidae View MSA
124062938 5270 Rosid View MSA
123747497 5271 Pentapetalae View MSA
122794612 5272 Eudicot View MSA
122049450 5273 Angiosperm View MSA
121349779 5274 Embryophyte View MSA
123427624 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.54576 0.0 5.42708    
cufflinks 0.245698 0.0 0.951512 Low  
cufflinks 1.24093 0.0 4.4139    
cufflinks 0.50497 0.0 1.8943    
cufflinks 1.52519 0.0 5.36305    
cufflinks 1.30924 0.0 4.65241    
cufflinks 0.0308434 0.0 0.13284 Low Low
cufflinks 1.13637 0.0 4.07854    
cufflinks 0.627225 0.0 2.32933    
cufflinks 0.673        
cufflinks 1.73       High
cufflinks 2.056       High
cufflinks 0.839        
cufflinks 1.112        
cufflinks 0.067       Low
cufflinks 0.363        
cufflinks 0.512        
cufflinks 0.865        
cufflinks 0.124       Low
cufflinks 0.338        
cufflinks 0.917        
cufflinks 0.386        
cufflinks 0.275        
cufflinks 0.311        
cufflinks 0.515        
cufflinks 0.939        

0 Strain