Gene : Glyma.06G168300 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR22814:SF13 - FARNESYLATED PROTEIN 3-RELATED Genomic Order:  1683
Name:  ? Glyma.06G168300 Secondary Identifier:  ? PAC:30552975
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G168300 0.5kb upstream 0.5kb upstream 2972 true Chr06: 14057471-14060442 Glycine max
Glyma.06G168300 0.5kb upstream 0.5kb upstream 500 false Chr06: 14059943-14060442 Glycine max
Glyma.06G168300 0.5kb downstream 0.5kb downstream 2972 true Chr06: 14056971-14059942 Glycine max
Glyma.06G168300 0.5kb downstream 0.5kb downstream 500 false Chr06: 14056971-14057470 Glycine max
Glyma.06G168300 1.0kb upstream 1.0kb upstream 3472 true Chr06: 14057471-14060942 Glycine max
Glyma.06G168300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14059943-14060942 Glycine max
Glyma.06G168300 1.0kb downstream 1.0kb downstream 3472 true Chr06: 14056471-14059942 Glycine max
Glyma.06G168300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14056471-14057470 Glycine max
Glyma.06G168300 2.0kb upstream 2.0kb upstream 4472 true Chr06: 14057471-14061942 Glycine max
Glyma.06G168300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14059943-14061942 Glycine max
Glyma.06G168300 2.0kb downstream 2.0kb downstream 4472 true Chr06: 14055471-14059942 Glycine max
Glyma.06G168300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14055471-14057470 Glycine max
Glyma.06G168300 5.0kb upstream 5.0kb upstream 7472 true Chr06: 14057471-14064942 Glycine max
Glyma.06G168300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14059943-14064942 Glycine max
Glyma.06G168300 5.0kb downstream 5.0kb downstream 7472 true Chr06: 14052471-14059942 Glycine max
Glyma.06G168300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14052471-14057470 Glycine max
Glyma.06G168300 10.0kb upstream 10.0kb upstream 12472 true Chr06: 14057471-14069942 Glycine max
Glyma.06G168300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14059943-14069942 Glycine max
Glyma.06G168300 10.0kb downstream 10.0kb downstream 12472 true Chr06: 14047471-14059942 Glycine max
Glyma.06G168300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14047471-14057470 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309250 5265 Fabidae View MSA
124070367 5270 Rosid View MSA
123750804 5271 Pentapetalae View MSA
122795172 5272 Eudicot View MSA
122041833 5273 Angiosperm View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.14107 0.0 14.9532   Low
cufflinks 10.5782 0.0 37.5988    
cufflinks 68.2259 0.0 261.511 High  
cufflinks 80.8977 0.0 336.212 High High
cufflinks 21.0926 0.0 73.3878 High  
cufflinks 19.0475 0.0 65.8333    
cufflinks 103.436 0.0 473.505 High High
cufflinks 24.2834 0.0 85.9807 High  
cufflinks 9.6915 0.0 34.3122    
cufflinks 5.658        
cufflinks 34.789     High High
cufflinks 10.895     High  
cufflinks 5.586        
cufflinks 12.467     High  
cufflinks 1.073        
cufflinks 1.308        
cufflinks 0.496       Low
cufflinks 6.19        
cufflinks 2.744        
cufflinks 1.462        
cufflinks 23.615     High High
cufflinks 1.186        
cufflinks 0.68       Low
cufflinks 27.627     High High
cufflinks 1.189        
cufflinks 5.518        

0 Strain