Gene : Glyma.06G170700 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13780:SF36 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT GAMMA-1 Genomic Order:  1707
Name:  ? Glyma.06G170700 Secondary Identifier:  ? PAC:30550372
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G170700 0.5kb upstream 0.5kb upstream 4811 true Chr06: 14288952-14293762 Glycine max
Glyma.06G170700 0.5kb upstream 0.5kb upstream 500 false Chr06: 14293263-14293762 Glycine max
Glyma.06G170700 0.5kb downstream 0.5kb downstream 4811 true Chr06: 14288452-14293262 Glycine max
Glyma.06G170700 0.5kb downstream 0.5kb downstream 500 false Chr06: 14288452-14288951 Glycine max
Glyma.06G170700 1.0kb upstream 1.0kb upstream 5311 true Chr06: 14288952-14294262 Glycine max
Glyma.06G170700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14293263-14294262 Glycine max
Glyma.06G170700 1.0kb downstream 1.0kb downstream 5311 true Chr06: 14287952-14293262 Glycine max
Glyma.06G170700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14287952-14288951 Glycine max
Glyma.06G170700 2.0kb upstream 2.0kb upstream 6311 true Chr06: 14288952-14295262 Glycine max
Glyma.06G170700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14293263-14295262 Glycine max
Glyma.06G170700 2.0kb downstream 2.0kb downstream 6311 true Chr06: 14286952-14293262 Glycine max
Glyma.06G170700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14286952-14288951 Glycine max
Glyma.06G170700 5.0kb upstream 5.0kb upstream 9311 true Chr06: 14288952-14298262 Glycine max
Glyma.06G170700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14293263-14298262 Glycine max
Glyma.06G170700 5.0kb downstream 5.0kb downstream 9311 true Chr06: 14283952-14293262 Glycine max
Glyma.06G170700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14283952-14288951 Glycine max
Glyma.06G170700 10.0kb upstream 10.0kb upstream 14311 true Chr06: 14288952-14303262 Glycine max
Glyma.06G170700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14293263-14303262 Glycine max
Glyma.06G170700 10.0kb downstream 10.0kb downstream 14311 true Chr06: 14278952-14293262 Glycine max
Glyma.06G170700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14278952-14288951 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314205 5265 Fabidae View MSA
124068322 5270 Rosid View MSA
123743835 5271 Pentapetalae View MSA
122791351 5272 Eudicot View MSA
122045346 5273 Angiosperm View MSA
121348243 5274 Embryophyte View MSA
123427907 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.6877 0.0 124.974 High High
cufflinks 6.24683 0.0 19.1502    
cufflinks 33.6246 0.0 113.442 High High
cufflinks 2.39683 0.0 8.536   Low
cufflinks 8.79722 0.0 26.3443    
cufflinks 11.1261 0.0 32.9199    
cufflinks 26.143 0.0 83.346 High  
cufflinks 2.71563 0.0 9.40368   Low
cufflinks 19.633 0.0 61.0345 High  
cufflinks 1.05       Low
cufflinks 167.918     High High
cufflinks 15.989     High  
cufflinks 4.169        
cufflinks 7.468     High  
cufflinks 66.106     High  
cufflinks 22.66     High  
cufflinks 4.957        
cufflinks 3.302       Low
cufflinks 4.528        
cufflinks 45.408     High  
cufflinks 84.562     High High
cufflinks 23.118     High  
cufflinks 5.021        
cufflinks 96.775     High High
cufflinks 37.318     High  
cufflinks 26.479     High  

0 Strain