Gene : Glyma.06G171500 G. max Wm82.a2.v1
Defline:  (1 of 2) 5.5.1.9 - Cycloeucalenol cycloisomerase / Cycloeucalenol--obtusifoliol isomerase Genomic Order:  1715
Name:  ? Glyma.06G171500 Secondary Identifier:  ? PAC:30550737
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-2541 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G171500 0.5kb upstream 0.5kb upstream 5691 true Chr06: 14355805-14361495 Glycine max
Glyma.06G171500 0.5kb upstream 0.5kb upstream 500 false Chr06: 14360996-14361495 Glycine max
Glyma.06G171500 0.5kb downstream 0.5kb downstream 5691 true Chr06: 14355305-14360995 Glycine max
Glyma.06G171500 0.5kb downstream 0.5kb downstream 500 false Chr06: 14355305-14355804 Glycine max
Glyma.06G171500 1.0kb upstream 1.0kb upstream 6191 true Chr06: 14355805-14361995 Glycine max
Glyma.06G171500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14360996-14361995 Glycine max
Glyma.06G171500 1.0kb downstream 1.0kb downstream 6191 true Chr06: 14354805-14360995 Glycine max
Glyma.06G171500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14354805-14355804 Glycine max
Glyma.06G171500 2.0kb upstream 2.0kb upstream 7191 true Chr06: 14355805-14362995 Glycine max
Glyma.06G171500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14360996-14362995 Glycine max
Glyma.06G171500 2.0kb downstream 2.0kb downstream 7191 true Chr06: 14353805-14360995 Glycine max
Glyma.06G171500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14353805-14355804 Glycine max
Glyma.06G171500 5.0kb upstream 5.0kb upstream 10191 true Chr06: 14355805-14365995 Glycine max
Glyma.06G171500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14360996-14365995 Glycine max
Glyma.06G171500 5.0kb downstream 5.0kb downstream 10191 true Chr06: 14350805-14360995 Glycine max
Glyma.06G171500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14350805-14355804 Glycine max
Glyma.06G171500 10.0kb upstream 10.0kb upstream 15191 true Chr06: 14355805-14370995 Glycine max
Glyma.06G171500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14360996-14370995 Glycine max
Glyma.06G171500 10.0kb downstream 10.0kb downstream 15191 true Chr06: 14345805-14360995 Glycine max
Glyma.06G171500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14345805-14355804 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300790 5265 Fabidae View MSA
124063919 5270 Rosid View MSA
123740858 5271 Pentapetalae View MSA
122788085 5272 Eudicot View MSA
122046906 5273 Angiosperm View MSA
121345110 5274 Embryophyte View MSA
123424971 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.9169 0.0 43.0255    
cufflinks 16.6081 0.0 57.548    
cufflinks 9.02975 0.0 34.189   Low
cufflinks 19.0714 0.0 65.4809   High
cufflinks 15.9605 0.0 55.5054    
cufflinks 7.29133 0.0 29.065   Low
cufflinks 12.8667 0.0 45.7569    
cufflinks 21.3797 0.0 73.2022 High High
cufflinks 11.0477 0.0 39.9865    
cufflinks 2.841        
cufflinks 0.044     Low Low
cufflinks 1.204        
cufflinks 2.12        
cufflinks 3.212       High
cufflinks 0.194       Low
cufflinks 1.348        
cufflinks 0.71        
cufflinks 2.207        
cufflinks 2.323        
cufflinks 1.228        
cufflinks 0.134       Low
cufflinks 1.436        
cufflinks 2.012        
cufflinks 0.112       Low
cufflinks 1.358        
cufflinks 0.366        

0 Strain