Gene : Glyma.06G171900 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR24096:SF251 - 4-COUMARATE--COA LIGASE-LIKE 9 Genomic Order:  1719
Name:  ? Glyma.06G171900 Secondary Identifier:  ? PAC:30549155
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G171900 0.5kb upstream 0.5kb upstream 5126 true Chr06: 14391902-14397027 Glycine max
Glyma.06G171900 0.5kb upstream 0.5kb upstream 500 false Chr06: 14391902-14392401 Glycine max
Glyma.06G171900 0.5kb downstream 0.5kb downstream 5126 true Chr06: 14392402-14397527 Glycine max
Glyma.06G171900 0.5kb downstream 0.5kb downstream 500 false Chr06: 14397028-14397527 Glycine max
Glyma.06G171900 1.0kb upstream 1.0kb upstream 5626 true Chr06: 14391402-14397027 Glycine max
Glyma.06G171900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14391402-14392401 Glycine max
Glyma.06G171900 1.0kb downstream 1.0kb downstream 5626 true Chr06: 14392402-14398027 Glycine max
Glyma.06G171900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14397028-14398027 Glycine max
Glyma.06G171900 2.0kb upstream 2.0kb upstream 6626 true Chr06: 14390402-14397027 Glycine max
Glyma.06G171900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14390402-14392401 Glycine max
Glyma.06G171900 2.0kb downstream 2.0kb downstream 6626 true Chr06: 14392402-14399027 Glycine max
Glyma.06G171900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14397028-14399027 Glycine max
Glyma.06G171900 5.0kb upstream 5.0kb upstream 9626 true Chr06: 14387402-14397027 Glycine max
Glyma.06G171900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14387402-14392401 Glycine max
Glyma.06G171900 5.0kb downstream 5.0kb downstream 9626 true Chr06: 14392402-14402027 Glycine max
Glyma.06G171900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14397028-14402027 Glycine max
Glyma.06G171900 10.0kb upstream 10.0kb upstream 14626 true Chr06: 14382402-14397027 Glycine max
Glyma.06G171900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14382402-14392401 Glycine max
Glyma.06G171900 10.0kb downstream 10.0kb downstream 14626 true Chr06: 14392402-14407027 Glycine max
Glyma.06G171900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14397028-14407027 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304727 5265 Fabidae View MSA
124071918 5270 Rosid View MSA
123745043 5271 Pentapetalae View MSA
122795708 5272 Eudicot View MSA
122045138 5273 Angiosperm View MSA
121310405 5274 Embryophyte View MSA
123347895 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.57496 0.0 33.0454    
cufflinks 10.9481 0.0 37.5477    
cufflinks 22.0331 0.0 74.8325 High High
cufflinks 9.76092 0.0 33.1463    
cufflinks 6.91683 0.0 24.4579    
cufflinks 12.3032 0.0 41.7289    
cufflinks 7.00985 0.0 24.8615    
cufflinks 9.65344 0.0 32.9733    
cufflinks 5.76606 0.0 21.3332   Low
cufflinks 2.551        
cufflinks 0.247       Low
cufflinks 3.869       High
cufflinks 1.84        
cufflinks 0.43       Low
cufflinks 0.308       Low
cufflinks 1.107        
cufflinks 2.925        
cufflinks 2.89        
cufflinks 4.328       High
cufflinks 1.075        
cufflinks 0.427       Low
cufflinks 1.368        
cufflinks 2.773        
cufflinks 0.614        
cufflinks 1.286        
cufflinks 2.094        

0 Strain