Gene : Glyma.06G172100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR15840 - CGI-121 FAMILY MEMBER Genomic Order:  1721
Name:  ? Glyma.06G172100 Secondary Identifier:  ? PAC:30553129
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G172100 0.5kb upstream 0.5kb upstream 4762 true Chr06: 14407879-14412640 Glycine max
Glyma.06G172100 0.5kb upstream 0.5kb upstream 500 false Chr06: 14407879-14408378 Glycine max
Glyma.06G172100 0.5kb downstream 0.5kb downstream 4762 true Chr06: 14408379-14413140 Glycine max
Glyma.06G172100 0.5kb downstream 0.5kb downstream 500 false Chr06: 14412641-14413140 Glycine max
Glyma.06G172100 1.0kb upstream 1.0kb upstream 5262 true Chr06: 14407379-14412640 Glycine max
Glyma.06G172100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14407379-14408378 Glycine max
Glyma.06G172100 1.0kb downstream 1.0kb downstream 5262 true Chr06: 14408379-14413640 Glycine max
Glyma.06G172100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14412641-14413640 Glycine max
Glyma.06G172100 2.0kb upstream 2.0kb upstream 6262 true Chr06: 14406379-14412640 Glycine max
Glyma.06G172100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14406379-14408378 Glycine max
Glyma.06G172100 2.0kb downstream 2.0kb downstream 6262 true Chr06: 14408379-14414640 Glycine max
Glyma.06G172100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14412641-14414640 Glycine max
Glyma.06G172100 5.0kb upstream 5.0kb upstream 9262 true Chr06: 14403379-14412640 Glycine max
Glyma.06G172100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14403379-14408378 Glycine max
Glyma.06G172100 5.0kb downstream 5.0kb downstream 9262 true Chr06: 14408379-14417640 Glycine max
Glyma.06G172100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14412641-14417640 Glycine max
Glyma.06G172100 10.0kb upstream 10.0kb upstream 14262 true Chr06: 14398379-14412640 Glycine max
Glyma.06G172100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14398379-14408378 Glycine max
Glyma.06G172100 10.0kb downstream 10.0kb downstream 14262 true Chr06: 14408379-14422640 Glycine max
Glyma.06G172100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14412641-14422640 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026161 5273 Angiosperm View MSA
122307041 5265 Fabidae View MSA
124060531 5270 Rosid View MSA
123741056 5271 Pentapetalae View MSA
122787559 5272 Eudicot View MSA
121345637 5274 Embryophyte View MSA
123425208 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.19376 0.0 21.2853    
cufflinks 3.60054 0.0 19.4194    
cufflinks 2.508 0.0 19.7504    
cufflinks 2.02236 0.0 11.4113   Low
cufflinks 2.55687 0.0 19.2901    
cufflinks 2.10967 0.0 11.6578   Low
cufflinks 4.241 0.0 24.7153   High
cufflinks 4.16262 0.0 24.1918   High
cufflinks 2.86738 0.0 20.4413    
cufflinks 0.244        
cufflinks 0.135       Low
cufflinks 0.334        
cufflinks 0.337        
cufflinks 0.388       High
cufflinks 0.183       Low
cufflinks 0.283        
cufflinks 0.235        
cufflinks 0.329        
cufflinks 0.439       High
cufflinks 0.179       Low
cufflinks 0.186        
cufflinks 0.238        
cufflinks 0.341        
cufflinks 0.226        
cufflinks 0.247        
cufflinks 0.206        

0 Strain