Gene : Glyma.06G173100 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.3.99.22 - Coproporphyrinogen dehydrogenase / Oxygen-independent coproporphyrinogen-III oxidase Genomic Order:  1731
Name:  ? Glyma.06G173100 Secondary Identifier:  ? PAC:30551738
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G173100 0.5kb upstream 0.5kb upstream 2471 true Chr06: 14532133-14534603 Glycine max
Glyma.06G173100 0.5kb upstream 0.5kb upstream 500 false Chr06: 14532133-14532632 Glycine max
Glyma.06G173100 0.5kb downstream 0.5kb downstream 2471 true Chr06: 14532633-14535103 Glycine max
Glyma.06G173100 0.5kb downstream 0.5kb downstream 500 false Chr06: 14534604-14535103 Glycine max
Glyma.06G173100 1.0kb upstream 1.0kb upstream 2971 true Chr06: 14531633-14534603 Glycine max
Glyma.06G173100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 14531633-14532632 Glycine max
Glyma.06G173100 1.0kb downstream 1.0kb downstream 2971 true Chr06: 14532633-14535603 Glycine max
Glyma.06G173100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 14534604-14535603 Glycine max
Glyma.06G173100 2.0kb upstream 2.0kb upstream 3971 true Chr06: 14530633-14534603 Glycine max
Glyma.06G173100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 14530633-14532632 Glycine max
Glyma.06G173100 2.0kb downstream 2.0kb downstream 3971 true Chr06: 14532633-14536603 Glycine max
Glyma.06G173100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 14534604-14536603 Glycine max
Glyma.06G173100 5.0kb upstream 5.0kb upstream 6971 true Chr06: 14527633-14534603 Glycine max
Glyma.06G173100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 14527633-14532632 Glycine max
Glyma.06G173100 5.0kb downstream 5.0kb downstream 6971 true Chr06: 14532633-14539603 Glycine max
Glyma.06G173100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 14534604-14539603 Glycine max
Glyma.06G173100 10.0kb upstream 10.0kb upstream 11971 true Chr06: 14522633-14534603 Glycine max
Glyma.06G173100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 14522633-14532632 Glycine max
Glyma.06G173100 10.0kb downstream 10.0kb downstream 11971 true Chr06: 14532633-14544603 Glycine max
Glyma.06G173100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 14534604-14544603 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308896 5265 Fabidae View MSA
124062342 5270 Rosid View MSA
123740173 5271 Pentapetalae View MSA
122786223 5272 Eudicot View MSA
122048362 5273 Angiosperm View MSA
121344861 5274 Embryophyte View MSA
123424755 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.845108 0.0 3.05716   High
cufflinks 0.405267 0.0 1.52451    
cufflinks 0.19312 0.0 0.750736 Low  
cufflinks 0.250283 0.0 0.96162    
cufflinks 0.263304 0.0 1.00857    
cufflinks 0.133638 0.0 0.526546 Low Low
cufflinks 0.329092 0.0 1.24765    
cufflinks 0.139757 0.0 0.549405 Low Low
cufflinks 0.368166 0.0 1.38998    
cufflinks 0.14       Low
cufflinks 0.153       Low
cufflinks 0.318        
cufflinks 0.242        
cufflinks 0.262        
cufflinks 0.272        
cufflinks 0.336        
cufflinks 0.234        
cufflinks 0.259        
cufflinks 0.375       High
cufflinks 0.274        
cufflinks 0.112       Low
cufflinks 0.309        
cufflinks 0.343       High
cufflinks 0.124       Low
cufflinks 0.23        
cufflinks 0.217        

0 Strain