Gene : Glyma.06G225100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31807:SF2 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 8 Genomic Order:  2251
Name:  ? Glyma.06G225100 Secondary Identifier:  ? PAC:30552764
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G225100 0.5kb upstream 0.5kb upstream 12306 true Chr06: 30788458-30800763 Glycine max
Glyma.06G225100 0.5kb upstream 0.5kb upstream 500 false Chr06: 30788458-30788957 Glycine max
Glyma.06G225100 0.5kb downstream 0.5kb downstream 12306 true Chr06: 30788958-30801263 Glycine max
Glyma.06G225100 0.5kb downstream 0.5kb downstream 500 false Chr06: 30800764-30801263 Glycine max
Glyma.06G225100 1.0kb upstream 1.0kb upstream 12806 true Chr06: 30787958-30800763 Glycine max
Glyma.06G225100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 30787958-30788957 Glycine max
Glyma.06G225100 1.0kb downstream 1.0kb downstream 12806 true Chr06: 30788958-30801763 Glycine max
Glyma.06G225100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 30800764-30801763 Glycine max
Glyma.06G225100 2.0kb upstream 2.0kb upstream 13806 true Chr06: 30786958-30800763 Glycine max
Glyma.06G225100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 30786958-30788957 Glycine max
Glyma.06G225100 2.0kb downstream 2.0kb downstream 13806 true Chr06: 30788958-30802763 Glycine max
Glyma.06G225100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 30800764-30802763 Glycine max
Glyma.06G225100 5.0kb upstream 5.0kb upstream 16806 true Chr06: 30783958-30800763 Glycine max
Glyma.06G225100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 30783958-30788957 Glycine max
Glyma.06G225100 5.0kb downstream 5.0kb downstream 16806 true Chr06: 30788958-30805763 Glycine max
Glyma.06G225100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 30800764-30805763 Glycine max
Glyma.06G225100 10.0kb upstream 10.0kb upstream 21806 true Chr06: 30778958-30800763 Glycine max
Glyma.06G225100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 30778958-30788957 Glycine max
Glyma.06G225100 10.0kb downstream 10.0kb downstream 21806 true Chr06: 30788958-30810763 Glycine max
Glyma.06G225100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 30800764-30810763 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309736 5265 Fabidae View MSA
124066469 5270 Rosid View MSA
123747481 5271 Pentapetalae View MSA
122790294 5272 Eudicot View MSA
122050322 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.19483 0.0 20.391    
cufflinks 3.4075 0.0 14.0458    
cufflinks 2.32289 0.0 15.4737    
cufflinks 5.82947 0.0 32.1759   High
cufflinks 3.14409 0.0 20.5469    
cufflinks 4.02222 0.0 23.6579    
cufflinks 5.77308 0.0 24.1341   High
cufflinks 4.54774 0.0 23.0634    
cufflinks 1.15648 0.0 11.1772   Low
cufflinks 0.179       High
cufflinks 0.027     Low Low
cufflinks 0.093     Low  
cufflinks 0.063     Low  
cufflinks 0.08        
cufflinks 0.009     Low Low
cufflinks 0.128        
cufflinks 0.027     Low Low
cufflinks 0.175       High
cufflinks 0.116        
cufflinks 0.136        
cufflinks 0.031     Low  
cufflinks 0.141        
cufflinks 0.113        
cufflinks 0.034     Low  
cufflinks 0.116        
cufflinks 0.029     Low  

0 Strain