Gene : Glyma.06G210800 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13677:SF0 - PROTEIN F53H1.3, ISOFORM A Genomic Order:  2108
Name:  ? Glyma.06G210800 Secondary Identifier:  ? PAC:30553211
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Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G210800 0.5kb upstream 0.5kb upstream 7210 true Chr06: 20918449-20925658 Glycine max
Glyma.06G210800 0.5kb upstream 0.5kb upstream 500 false Chr06: 20918449-20918948 Glycine max
Glyma.06G210800 0.5kb downstream 0.5kb downstream 7210 true Chr06: 20918949-20926158 Glycine max
Glyma.06G210800 0.5kb downstream 0.5kb downstream 500 false Chr06: 20925659-20926158 Glycine max
Glyma.06G210800 1.0kb upstream 1.0kb upstream 7710 true Chr06: 20917949-20925658 Glycine max
Glyma.06G210800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 20917949-20918948 Glycine max
Glyma.06G210800 1.0kb downstream 1.0kb downstream 7710 true Chr06: 20918949-20926658 Glycine max
Glyma.06G210800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 20925659-20926658 Glycine max
Glyma.06G210800 2.0kb upstream 2.0kb upstream 8710 true Chr06: 20916949-20925658 Glycine max
Glyma.06G210800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 20916949-20918948 Glycine max
Glyma.06G210800 2.0kb downstream 2.0kb downstream 8710 true Chr06: 20918949-20927658 Glycine max
Glyma.06G210800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 20925659-20927658 Glycine max
Glyma.06G210800 5.0kb upstream 5.0kb upstream 11710 true Chr06: 20913949-20925658 Glycine max
Glyma.06G210800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 20913949-20918948 Glycine max
Glyma.06G210800 5.0kb downstream 5.0kb downstream 11710 true Chr06: 20918949-20930658 Glycine max
Glyma.06G210800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 20925659-20930658 Glycine max
Glyma.06G210800 10.0kb upstream 10.0kb upstream 16710 true Chr06: 20908949-20925658 Glycine max
Glyma.06G210800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 20908949-20918948 Glycine max
Glyma.06G210800 10.0kb downstream 10.0kb downstream 16710 true Chr06: 20918949-20935658 Glycine max
Glyma.06G210800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 20925659-20935658 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310377 5265 Fabidae View MSA
124067041 5270 Rosid View MSA
123739049 5271 Pentapetalae View MSA
122789935 5272 Eudicot View MSA
122046522 5273 Angiosperm View MSA
121346566 5274 Embryophyte View MSA
123427841 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.83135 0.0 8.37852   Low
cufflinks 4.97126 0.0 13.7779    
cufflinks 4.44336 0.0 12.4203    
cufflinks 5.56499 0.0 15.2795   High
cufflinks 4.54435 0.0 12.7174    
cufflinks 4.24956 0.0 11.9441    
cufflinks 4.73753 0.0 13.2157    
cufflinks 5.06638 0.0 14.0101    
cufflinks 3.74396 0.0 10.6732    
cufflinks 2.226        
cufflinks 0.784       Low
cufflinks 2.048        
cufflinks 2.274        
cufflinks 2.398        
cufflinks 0.544       Low
cufflinks 2.21        
cufflinks 0.841       Low
cufflinks 2.748       High
cufflinks 2.181        
cufflinks 2.31        
cufflinks 0.859       Low
cufflinks 2.127        
cufflinks 1.975        
cufflinks 1.236        
cufflinks 1.951        
cufflinks 0.973        

0 Strain