Gene : Glyma.06G205800 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11945//PTHR11945:SF166 - MADS BOX PROTEIN Genomic Order:  2058
Name:  ? Glyma.06G205800 Secondary Identifier:  ? PAC:30554012
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G205800 0.5kb upstream 0.5kb upstream 7678 true Chr06: 19583229-19590906 Glycine max
Glyma.06G205800 0.5kb upstream 0.5kb upstream 500 false Chr06: 19583229-19583728 Glycine max
Glyma.06G205800 0.5kb downstream 0.5kb downstream 7678 true Chr06: 19583729-19591406 Glycine max
Glyma.06G205800 0.5kb downstream 0.5kb downstream 500 false Chr06: 19590907-19591406 Glycine max
Glyma.06G205800 1.0kb upstream 1.0kb upstream 8178 true Chr06: 19582729-19590906 Glycine max
Glyma.06G205800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19582729-19583728 Glycine max
Glyma.06G205800 1.0kb downstream 1.0kb downstream 8178 true Chr06: 19583729-19591906 Glycine max
Glyma.06G205800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19590907-19591906 Glycine max
Glyma.06G205800 2.0kb upstream 2.0kb upstream 9178 true Chr06: 19581729-19590906 Glycine max
Glyma.06G205800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19581729-19583728 Glycine max
Glyma.06G205800 2.0kb downstream 2.0kb downstream 9178 true Chr06: 19583729-19592906 Glycine max
Glyma.06G205800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19590907-19592906 Glycine max
Glyma.06G205800 5.0kb upstream 5.0kb upstream 12178 true Chr06: 19578729-19590906 Glycine max
Glyma.06G205800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19578729-19583728 Glycine max
Glyma.06G205800 5.0kb downstream 5.0kb downstream 12178 true Chr06: 19583729-19595906 Glycine max
Glyma.06G205800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19590907-19595906 Glycine max
Glyma.06G205800 10.0kb upstream 10.0kb upstream 17178 true Chr06: 19573729-19590906 Glycine max
Glyma.06G205800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19573729-19583728 Glycine max
Glyma.06G205800 10.0kb downstream 10.0kb downstream 17178 true Chr06: 19583729-19600906 Glycine max
Glyma.06G205800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19590907-19600906 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041064 5273 Angiosperm View MSA
122302751 5265 Fabidae View MSA
124072328 5270 Rosid View MSA
123751710 5271 Pentapetalae View MSA
122788972 5272 Eudicot View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.136013 0.0 0.537117 Low  
cufflinks 7.08216 0.0 20.1317    
cufflinks 31.1485 0.0 83.5632 High High
cufflinks 0.0409579 0.0 0.171402 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0704106 0.0 0.285615 Low  
cufflinks 2.15338 0.0 7.23289    
cufflinks 0.364281 0.0 1.38276    
cufflinks 0.069     Low  
cufflinks 0.071        
cufflinks 3.02       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.002     Low Low
cufflinks 0.038     Low  
cufflinks 1.358       High
cufflinks 0.007     Low  
cufflinks 0.002     Low Low
cufflinks 0.205        
cufflinks 0.002     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.043     Low  
cufflinks 0.002     Low Low
cufflinks 0.063     Low  

0 Strain