Gene : Glyma.06G207100 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR33209:SF1 - SERINE PROTEASE SPPA, CHLOROPLASTIC Genomic Order:  2071
Name:  ? Glyma.06G207100 Secondary Identifier:  ? PAC:30553022
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G207100 0.5kb upstream 0.5kb upstream 7346 true Chr06: 19963095-19970440 Glycine max
Glyma.06G207100 0.5kb upstream 0.5kb upstream 500 false Chr06: 19969941-19970440 Glycine max
Glyma.06G207100 0.5kb downstream 0.5kb downstream 7346 true Chr06: 19962595-19969940 Glycine max
Glyma.06G207100 0.5kb downstream 0.5kb downstream 500 false Chr06: 19962595-19963094 Glycine max
Glyma.06G207100 1.0kb upstream 1.0kb upstream 7846 true Chr06: 19963095-19970940 Glycine max
Glyma.06G207100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 19969941-19970940 Glycine max
Glyma.06G207100 1.0kb downstream 1.0kb downstream 7846 true Chr06: 19962095-19969940 Glycine max
Glyma.06G207100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 19962095-19963094 Glycine max
Glyma.06G207100 2.0kb upstream 2.0kb upstream 8846 true Chr06: 19963095-19971940 Glycine max
Glyma.06G207100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 19969941-19971940 Glycine max
Glyma.06G207100 2.0kb downstream 2.0kb downstream 8846 true Chr06: 19961095-19969940 Glycine max
Glyma.06G207100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 19961095-19963094 Glycine max
Glyma.06G207100 5.0kb upstream 5.0kb upstream 11846 true Chr06: 19963095-19974940 Glycine max
Glyma.06G207100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 19969941-19974940 Glycine max
Glyma.06G207100 5.0kb downstream 5.0kb downstream 11846 true Chr06: 19958095-19969940 Glycine max
Glyma.06G207100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 19958095-19963094 Glycine max
Glyma.06G207100 10.0kb upstream 10.0kb upstream 16846 true Chr06: 19963095-19979940 Glycine max
Glyma.06G207100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 19969941-19979940 Glycine max
Glyma.06G207100 10.0kb downstream 10.0kb downstream 16846 true Chr06: 19953095-19969940 Glycine max
Glyma.06G207100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 19953095-19963094 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779447 5273 Angiosperm View MSA
122298919 5265 Fabidae View MSA
124036641 5270 Rosid View MSA
123742912 5271 Pentapetalae View MSA
122770439 5272 Eudicot View MSA
121051107 5274 Embryophyte View MSA
123426271 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.1908E-4 0.0 0.00788636 Low  
cufflinks 0.0668131 0.0 0.276963 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0265137 0.0 0.1181 Low  
cufflinks 5.77213E-5 0.0 0.00226873 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 6.98693E-4 0.0 0.00845184 Low  
cufflinks 0.156911 0.0 0.624586 Low High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.133        
cufflinks 0.031     Low Low
cufflinks 0.135        
cufflinks 0.032     Low  
cufflinks 0.025     Low Low
cufflinks 0.069        
cufflinks 0.584       High
cufflinks 0.036     Low  
cufflinks 0.139        
cufflinks 0.163        
cufflinks 0.57       High
cufflinks 0.029     Low Low
cufflinks 0.615       High
cufflinks 0.332        
cufflinks 0.034     Low  
cufflinks 0.572       High
cufflinks 0.036     Low  

0 Strain