Gene : Glyma.06G195800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR10657 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  1958
Name:  ? Glyma.06G195800 Secondary Identifier:  ? PAC:30551371
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G195800 0.5kb upstream 0.5kb upstream 4483 true Chr06: 17584250-17588732 Glycine max
Glyma.06G195800 0.5kb upstream 0.5kb upstream 500 false Chr06: 17584250-17584749 Glycine max
Glyma.06G195800 0.5kb downstream 0.5kb downstream 4483 true Chr06: 17584750-17589232 Glycine max
Glyma.06G195800 0.5kb downstream 0.5kb downstream 500 false Chr06: 17588733-17589232 Glycine max
Glyma.06G195800 1.0kb upstream 1.0kb upstream 4983 true Chr06: 17583750-17588732 Glycine max
Glyma.06G195800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17583750-17584749 Glycine max
Glyma.06G195800 1.0kb downstream 1.0kb downstream 4983 true Chr06: 17584750-17589732 Glycine max
Glyma.06G195800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17588733-17589732 Glycine max
Glyma.06G195800 2.0kb upstream 2.0kb upstream 5983 true Chr06: 17582750-17588732 Glycine max
Glyma.06G195800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17582750-17584749 Glycine max
Glyma.06G195800 2.0kb downstream 2.0kb downstream 5983 true Chr06: 17584750-17590732 Glycine max
Glyma.06G195800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17588733-17590732 Glycine max
Glyma.06G195800 5.0kb upstream 5.0kb upstream 8983 true Chr06: 17579750-17588732 Glycine max
Glyma.06G195800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17579750-17584749 Glycine max
Glyma.06G195800 5.0kb downstream 5.0kb downstream 8983 true Chr06: 17584750-17593732 Glycine max
Glyma.06G195800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17588733-17593732 Glycine max
Glyma.06G195800 10.0kb upstream 10.0kb upstream 13983 true Chr06: 17574750-17588732 Glycine max
Glyma.06G195800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17574750-17584749 Glycine max
Glyma.06G195800 10.0kb downstream 10.0kb downstream 13983 true Chr06: 17584750-17598732 Glycine max
Glyma.06G195800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17588733-17598732 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121610930 5273 Angiosperm Singleton cluster - no MSA
122243828 5265 Fabidae Singleton cluster - no MSA
123988263 5270 Rosid Singleton cluster - no MSA
123563460 5271 Pentapetalae Singleton cluster - no MSA
122598239 5272 Eudicot Singleton cluster - no MSA
123429014 5275 Viridiplantae View MSA
120883168 5274 Embryophyte Singleton cluster - no MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.8705 0.0 131.904 High  
cufflinks 31.0467 0.0 83.3455 High Low
cufflinks 33.2518 0.0 89.6293 High  
cufflinks 33.5346 0.0 90.3975 High  
cufflinks 38.5577 0.0 104.627 High  
cufflinks 55.6045 0.0 155.492 High High
cufflinks 58.7639 0.0 165.443 High High
cufflinks 37.0346 0.0 100.325 High  
cufflinks 45.6997 0.0 125.509 High  
cufflinks 13.273     High  
cufflinks 13.797     High  
cufflinks 15.593     High  
cufflinks 16.597     High High
cufflinks 18.314     High High
cufflinks 9.099     High Low
cufflinks 13.186     High  
cufflinks 11.884     High  
cufflinks 14.824     High  
cufflinks 11.249     High Low
cufflinks 16.765     High High
cufflinks 12.832     High  
cufflinks 15.116     High  
cufflinks 12.262     High  
cufflinks 13.543     High  
cufflinks 15.118     High  
cufflinks 12.738     High  

0 Strain