Gene : Glyma.06G195900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31889:SF2 - FUCOSYLTRANSFERASE 2-RELATED Genomic Order:  1959
Name:  ? Glyma.06G195900 Secondary Identifier:  ? PAC:30553904
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G195900 0.5kb upstream 0.5kb upstream 3554 true Chr06: 17590340-17593893 Glycine max
Glyma.06G195900 0.5kb upstream 0.5kb upstream 500 false Chr06: 17593394-17593893 Glycine max
Glyma.06G195900 0.5kb downstream 0.5kb downstream 3554 true Chr06: 17589840-17593393 Glycine max
Glyma.06G195900 0.5kb downstream 0.5kb downstream 500 false Chr06: 17589840-17590339 Glycine max
Glyma.06G195900 1.0kb upstream 1.0kb upstream 4054 true Chr06: 17590340-17594393 Glycine max
Glyma.06G195900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17593394-17594393 Glycine max
Glyma.06G195900 1.0kb downstream 1.0kb downstream 4054 true Chr06: 17589340-17593393 Glycine max
Glyma.06G195900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17589340-17590339 Glycine max
Glyma.06G195900 2.0kb upstream 2.0kb upstream 5054 true Chr06: 17590340-17595393 Glycine max
Glyma.06G195900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17593394-17595393 Glycine max
Glyma.06G195900 2.0kb downstream 2.0kb downstream 5054 true Chr06: 17588340-17593393 Glycine max
Glyma.06G195900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17588340-17590339 Glycine max
Glyma.06G195900 5.0kb upstream 5.0kb upstream 8054 true Chr06: 17590340-17598393 Glycine max
Glyma.06G195900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17593394-17598393 Glycine max
Glyma.06G195900 5.0kb downstream 5.0kb downstream 8054 true Chr06: 17585340-17593393 Glycine max
Glyma.06G195900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17585340-17590339 Glycine max
Glyma.06G195900 10.0kb upstream 10.0kb upstream 13054 true Chr06: 17590340-17603393 Glycine max
Glyma.06G195900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17593394-17603393 Glycine max
Glyma.06G195900 10.0kb downstream 10.0kb downstream 13054 true Chr06: 17580340-17593393 Glycine max
Glyma.06G195900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17580340-17590339 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296437 5265 Fabidae View MSA
124069231 5270 Rosid View MSA
123743529 5271 Pentapetalae View MSA
122787237 5272 Eudicot View MSA
122051157 5273 Angiosperm View MSA
121351526 5274 Embryophyte View MSA
123427849 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.75168 0.0 8.5788    
cufflinks 3.61197 0.0 10.8193    
cufflinks 1.36392 0.0 4.64881   Low
cufflinks 5.98082 0.0 16.8155    
cufflinks 9.37604 0.0 25.4668   High
cufflinks 6.416 0.0 17.9403    
cufflinks 5.21867 0.0 14.9638    
cufflinks 6.14945 0.0 17.2221    
cufflinks 4.76484 0.0 13.7569    
cufflinks 5.122       High
cufflinks 0.21       Low
cufflinks 1.664        
cufflinks 5.84       High
cufflinks 9.202     High High
cufflinks 0.394       Low
cufflinks 1.744        
cufflinks 0.92        
cufflinks 3.393        
cufflinks 3.055        
cufflinks 1.208        
cufflinks 0.47       Low
cufflinks 1.613        
cufflinks 2.403        
cufflinks 0.589        
cufflinks 1.1        
cufflinks 0.56        

0 Strain