Gene : Glyma.06G196500 G. max Wm82.a2.v1
Defline:  (1 of 136) PF05970//PF14214 - PIF1-like helicase (PIF1) // Helitron helicase-like domain at N-terminus (Helitron_like_N) Genomic Order:  1965
Name:  ? Glyma.06G196500 Secondary Identifier:  ? PAC:30550866
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0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G196500 0.5kb upstream 0.5kb upstream 5210 true Chr06: 17643394-17648603 Glycine max
Glyma.06G196500 0.5kb upstream 0.5kb upstream 500 false Chr06: 17648104-17648603 Glycine max
Glyma.06G196500 0.5kb downstream 0.5kb downstream 5210 true Chr06: 17642894-17648103 Glycine max
Glyma.06G196500 0.5kb downstream 0.5kb downstream 500 false Chr06: 17642894-17643393 Glycine max
Glyma.06G196500 1.0kb upstream 1.0kb upstream 5710 true Chr06: 17643394-17649103 Glycine max
Glyma.06G196500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 17648104-17649103 Glycine max
Glyma.06G196500 1.0kb downstream 1.0kb downstream 5710 true Chr06: 17642394-17648103 Glycine max
Glyma.06G196500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 17642394-17643393 Glycine max
Glyma.06G196500 2.0kb upstream 2.0kb upstream 6710 true Chr06: 17643394-17650103 Glycine max
Glyma.06G196500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 17648104-17650103 Glycine max
Glyma.06G196500 2.0kb downstream 2.0kb downstream 6710 true Chr06: 17641394-17648103 Glycine max
Glyma.06G196500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 17641394-17643393 Glycine max
Glyma.06G196500 5.0kb upstream 5.0kb upstream 9710 true Chr06: 17643394-17653103 Glycine max
Glyma.06G196500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 17648104-17653103 Glycine max
Glyma.06G196500 5.0kb downstream 5.0kb downstream 9710 true Chr06: 17638394-17648103 Glycine max
Glyma.06G196500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 17638394-17643393 Glycine max
Glyma.06G196500 10.0kb upstream 10.0kb upstream 14710 true Chr06: 17643394-17658103 Glycine max
Glyma.06G196500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 17648104-17658103 Glycine max
Glyma.06G196500 10.0kb downstream 10.0kb downstream 14710 true Chr06: 17633394-17648103 Glycine max
Glyma.06G196500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 17633394-17643393 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029830 5273 Angiosperm View MSA
122315190 5265 Fabidae View MSA
124051325 5270 Rosid View MSA
123752824 5271 Pentapetalae View MSA
122797633 5272 Eudicot View MSA
121351580 5274 Embryophyte View MSA
123426292 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.00333396 0.0 0.0160298 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 5.54245E-4 0.0 0.00413887 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain