Gene : Glyma.06G199600 G. max Wm82.a2.v1
Defline:  (1 of 1) PTHR12565:SF165 - TRANSCRIPTION FACTOR PIF7 Genomic Order:  1996
Name:  ? Glyma.06G199600 Secondary Identifier:  ? PAC:30551893
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G199600 0.5kb upstream 0.5kb upstream 6657 true Chr06: 18231850-18238506 Glycine max
Glyma.06G199600 0.5kb upstream 0.5kb upstream 500 false Chr06: 18238007-18238506 Glycine max
Glyma.06G199600 0.5kb downstream 0.5kb downstream 6657 true Chr06: 18231350-18238006 Glycine max
Glyma.06G199600 0.5kb downstream 0.5kb downstream 500 false Chr06: 18231350-18231849 Glycine max
Glyma.06G199600 1.0kb upstream 1.0kb upstream 7157 true Chr06: 18231850-18239006 Glycine max
Glyma.06G199600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 18238007-18239006 Glycine max
Glyma.06G199600 1.0kb downstream 1.0kb downstream 7157 true Chr06: 18230850-18238006 Glycine max
Glyma.06G199600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 18230850-18231849 Glycine max
Glyma.06G199600 2.0kb upstream 2.0kb upstream 8157 true Chr06: 18231850-18240006 Glycine max
Glyma.06G199600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 18238007-18240006 Glycine max
Glyma.06G199600 2.0kb downstream 2.0kb downstream 8157 true Chr06: 18229850-18238006 Glycine max
Glyma.06G199600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 18229850-18231849 Glycine max
Glyma.06G199600 5.0kb upstream 5.0kb upstream 11157 true Chr06: 18231850-18243006 Glycine max
Glyma.06G199600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 18238007-18243006 Glycine max
Glyma.06G199600 5.0kb downstream 5.0kb downstream 11157 true Chr06: 18226850-18238006 Glycine max
Glyma.06G199600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 18226850-18231849 Glycine max
Glyma.06G199600 10.0kb upstream 10.0kb upstream 16157 true Chr06: 18231850-18248006 Glycine max
Glyma.06G199600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 18238007-18248006 Glycine max
Glyma.06G199600 10.0kb downstream 10.0kb downstream 16157 true Chr06: 18221850-18238006 Glycine max
Glyma.06G199600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 18221850-18231849 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310247 5265 Fabidae View MSA
124071102 5270 Rosid View MSA
123749282 5271 Pentapetalae View MSA
122787317 5272 Eudicot View MSA
122050189 5273 Angiosperm View MSA
121311789 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.2432 0.0 41.8669   High
cufflinks 0.127602 0.0 0.922843 Low  
cufflinks 0.19357 0.0 1.32049 Low  
cufflinks 0.410042 0.0 1.93803    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0573853 0.0 0.231809 Low  
cufflinks 0.0358276 0.0 0.149337 Low Low
cufflinks 3.37008 0.0 12.5438   High
cufflinks 0.162763 0.0 0.802659 Low  
cufflinks 0.236        
cufflinks 0.002     Low Low
cufflinks 0.033     Low  
cufflinks 0.005     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.001     Low Low
cufflinks 0.212        
cufflinks 0.006     Low  
cufflinks 0.042     Low  
cufflinks 0.008     Low  
cufflinks 0.26        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.499       High
cufflinks 0.106        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.348       High
cufflinks 0.001     Low Low

0 Strain