Gene : Glyma.06G253700 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR23423//PTHR23423:SF31 - ORGANIC SOLUTE TRANSPORTER-RELATED Genomic Order:  2537
Name:  ? Glyma.06G253700 Secondary Identifier:  ? PAC:30551551
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G253700 0.5kb upstream 0.5kb upstream 6631 true Chr06: 43174614-43181244 Glycine max
Glyma.06G253700 0.5kb upstream 0.5kb upstream 500 false Chr06: 43174614-43175113 Glycine max
Glyma.06G253700 0.5kb downstream 0.5kb downstream 6631 true Chr06: 43175114-43181744 Glycine max
Glyma.06G253700 0.5kb downstream 0.5kb downstream 500 false Chr06: 43181245-43181744 Glycine max
Glyma.06G253700 1.0kb upstream 1.0kb upstream 7131 true Chr06: 43174114-43181244 Glycine max
Glyma.06G253700 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43174114-43175113 Glycine max
Glyma.06G253700 1.0kb downstream 1.0kb downstream 7131 true Chr06: 43175114-43182244 Glycine max
Glyma.06G253700 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43181245-43182244 Glycine max
Glyma.06G253700 2.0kb upstream 2.0kb upstream 8131 true Chr06: 43173114-43181244 Glycine max
Glyma.06G253700 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43173114-43175113 Glycine max
Glyma.06G253700 2.0kb downstream 2.0kb downstream 8131 true Chr06: 43175114-43183244 Glycine max
Glyma.06G253700 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43181245-43183244 Glycine max
Glyma.06G253700 5.0kb upstream 5.0kb upstream 11131 true Chr06: 43170114-43181244 Glycine max
Glyma.06G253700 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43170114-43175113 Glycine max
Glyma.06G253700 5.0kb downstream 5.0kb downstream 11131 true Chr06: 43175114-43186244 Glycine max
Glyma.06G253700 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43181245-43186244 Glycine max
Glyma.06G253700 10.0kb upstream 10.0kb upstream 16131 true Chr06: 43165114-43181244 Glycine max
Glyma.06G253700 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43165114-43175113 Glycine max
Glyma.06G253700 10.0kb downstream 10.0kb downstream 16131 true Chr06: 43175114-43191244 Glycine max
Glyma.06G253700 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43181245-43191244 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243797 5265 Fabidae Singleton cluster - no MSA
124042731 5270 Rosid View MSA
123757828 5271 Pentapetalae View MSA
122797538 5272 Eudicot View MSA
122044930 5273 Angiosperm View MSA
121344114 5274 Embryophyte View MSA
123379976 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4976 0.0 41.2149   High
cufflinks 3.63424 0.0 19.4179   Low
cufflinks 6.64626 0.0 28.1819    
cufflinks 5.04044 0.0 27.9142    
cufflinks 4.5874 0.0 22.759    
cufflinks 5.09561 0.0 21.2182    
cufflinks 5.12977 0.0 24.0018    
cufflinks 7.19503 0.0 32.4524    
cufflinks 4.23291 0.0 21.1606    
cufflinks 0.233        
cufflinks 0.119       Low
cufflinks 0.281        
cufflinks 0.283        
cufflinks 0.363       High
cufflinks 0.076       Low
cufflinks 0.197        
cufflinks 0.149        
cufflinks 0.285       High
cufflinks 0.197        
cufflinks 0.209        
cufflinks 0.147        
cufflinks 0.271        
cufflinks 0.191        
cufflinks 0.184        
cufflinks 0.185        
cufflinks 0.132        

0 Strain