Gene : Glyma.06G254200 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR11599:SF11 - PROTEASOME SUBUNIT ALPHA TYPE-6 Genomic Order:  2542
Name:  ? Glyma.06G254200 Secondary Identifier:  ? PAC:30551186
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G254200 0.5kb upstream 0.5kb upstream 5664 true Chr06: 43254694-43260357 Glycine max
Glyma.06G254200 0.5kb upstream 0.5kb upstream 500 false Chr06: 43259858-43260357 Glycine max
Glyma.06G254200 0.5kb downstream 0.5kb downstream 5664 true Chr06: 43254194-43259857 Glycine max
Glyma.06G254200 0.5kb downstream 0.5kb downstream 500 false Chr06: 43254194-43254693 Glycine max
Glyma.06G254200 1.0kb upstream 1.0kb upstream 6164 true Chr06: 43254694-43260857 Glycine max
Glyma.06G254200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43259858-43260857 Glycine max
Glyma.06G254200 1.0kb downstream 1.0kb downstream 6164 true Chr06: 43253694-43259857 Glycine max
Glyma.06G254200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43253694-43254693 Glycine max
Glyma.06G254200 2.0kb upstream 2.0kb upstream 7164 true Chr06: 43254694-43261857 Glycine max
Glyma.06G254200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43259858-43261857 Glycine max
Glyma.06G254200 2.0kb downstream 2.0kb downstream 7164 true Chr06: 43252694-43259857 Glycine max
Glyma.06G254200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43252694-43254693 Glycine max
Glyma.06G254200 5.0kb upstream 5.0kb upstream 10164 true Chr06: 43254694-43264857 Glycine max
Glyma.06G254200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43259858-43264857 Glycine max
Glyma.06G254200 5.0kb downstream 5.0kb downstream 10164 true Chr06: 43249694-43259857 Glycine max
Glyma.06G254200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43249694-43254693 Glycine max
Glyma.06G254200 10.0kb upstream 10.0kb upstream 15164 true Chr06: 43254694-43269857 Glycine max
Glyma.06G254200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43259858-43269857 Glycine max
Glyma.06G254200 10.0kb downstream 10.0kb downstream 15164 true Chr06: 43244694-43259857 Glycine max
Glyma.06G254200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43244694-43254693 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041382 5273 Angiosperm View MSA
122313818 5265 Fabidae View MSA
124061285 5270 Rosid View MSA
123742081 5271 Pentapetalae View MSA
122789367 5272 Eudicot View MSA
121345997 5274 Embryophyte View MSA
123424581 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.093 0.0 111.024 High Low
cufflinks 62.304 0.0 173.881 High  
cufflinks 46.8551 0.0 127.796 High Low
cufflinks 59.9932 0.0 166.743 High  
cufflinks 76.1663 0.0 217.022 High  
cufflinks 81.6 0.0 234.582 High High
cufflinks 64.6164 0.0 180.548 High  
cufflinks 75.4965 0.0 215.47 High  
cufflinks 63.0162 0.0 176.023 High  
cufflinks 13.003     High  
cufflinks 6.632     High Low
cufflinks 9.992     High  
cufflinks 21.371     High High
cufflinks 22.269     High High
cufflinks 4.701       Low
cufflinks 9.845     High  
cufflinks 8.402     High  
cufflinks 11.526     High  
cufflinks 12.766     High  
cufflinks 8.164     High  
cufflinks 8.255     High  
cufflinks 8.721     High  
cufflinks 9.726     High  
cufflinks 7.723     High  
cufflinks 8.233     High  
cufflinks 11.217     High  

0 Strain