Gene : Glyma.06G255000 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR24006:SF449 - PROTEIN C48D1.1, ISOFORM A-RELATED Genomic Order:  2550
Name:  ? Glyma.06G255000 Secondary Identifier:  ? PAC:30549541
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G255000 0.5kb upstream 0.5kb upstream 9542 true Chr06: 43432040-43441581 Glycine max
Glyma.06G255000 0.5kb upstream 0.5kb upstream 500 false Chr06: 43441082-43441581 Glycine max
Glyma.06G255000 0.5kb downstream 0.5kb downstream 9542 true Chr06: 43431540-43441081 Glycine max
Glyma.06G255000 0.5kb downstream 0.5kb downstream 500 false Chr06: 43431540-43432039 Glycine max
Glyma.06G255000 1.0kb upstream 1.0kb upstream 10042 true Chr06: 43432040-43442081 Glycine max
Glyma.06G255000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 43441082-43442081 Glycine max
Glyma.06G255000 1.0kb downstream 1.0kb downstream 10042 true Chr06: 43431040-43441081 Glycine max
Glyma.06G255000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 43431040-43432039 Glycine max
Glyma.06G255000 2.0kb upstream 2.0kb upstream 11042 true Chr06: 43432040-43443081 Glycine max
Glyma.06G255000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 43441082-43443081 Glycine max
Glyma.06G255000 2.0kb downstream 2.0kb downstream 11042 true Chr06: 43430040-43441081 Glycine max
Glyma.06G255000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 43430040-43432039 Glycine max
Glyma.06G255000 5.0kb upstream 5.0kb upstream 14042 true Chr06: 43432040-43446081 Glycine max
Glyma.06G255000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 43441082-43446081 Glycine max
Glyma.06G255000 5.0kb downstream 5.0kb downstream 14042 true Chr06: 43427040-43441081 Glycine max
Glyma.06G255000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 43427040-43432039 Glycine max
Glyma.06G255000 10.0kb upstream 10.0kb upstream 19042 true Chr06: 43432040-43451081 Glycine max
Glyma.06G255000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 43441082-43451081 Glycine max
Glyma.06G255000 10.0kb downstream 10.0kb downstream 19042 true Chr06: 43422040-43441081 Glycine max
Glyma.06G255000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 43422040-43432039 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300245 5265 Fabidae View MSA
124064180 5270 Rosid View MSA
123745589 5271 Pentapetalae View MSA
122786484 5272 Eudicot View MSA
122048085 5273 Angiosperm View MSA
121345286 5274 Embryophyte View MSA
123424236 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.41303 0.0 16.879   Low
cufflinks 9.43354 0.0 39.6299   High
cufflinks 5.43773 0.0 19.6985   Low
cufflinks 7.49627 0.0 25.9738    
cufflinks 9.12494 0.0 38.1519   High
cufflinks 5.43267 0.0 19.4228   Low
cufflinks 7.77129 0.0 27.0703    
cufflinks 7.65126 0.0 26.5769    
cufflinks 8.74792 0.0 30.1848    
cufflinks 1.144        
cufflinks 0.475       Low
cufflinks 1.1        
cufflinks 1.784       High
cufflinks 1.955       High
cufflinks 1.048        
cufflinks 1.195        
cufflinks 0.691       Low
cufflinks 1.331        
cufflinks 1.769       High
cufflinks 1.001        
cufflinks 0.751        
cufflinks 1.16        
cufflinks 1.379        
cufflinks 0.558       Low
cufflinks 1.083        
cufflinks 1.097        

0 Strain