Gene : Glyma.06G240100 G. max Wm82.a2.v1
Defline:  (1 of 3) 3.1.3.77//3.1.3.87//4.2.1.109//5.3.2.5 - Acireductone synthase / E-1 enolase-phosphatase // 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase / HK-MTPenyl-1-P phosphatase // Methylthioribulose 1-phosphate dehydratase / 1-PMT-ribulose dehydratase // 2,3-diketo-5-methylthiopentyl-1-phosphate enolase / RuBisCO-like protein Genomic Order:  2401
Name:  ? Glyma.06G240100 Secondary Identifier:  ? PAC:30549149
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-4361 Glycine max pathologic  
Gmax PWY-7270 Glycine max pathologic  
Gmax PWY-7528 Glycine max pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G240100 0.5kb upstream 0.5kb upstream 19036 true Chr06: 39596483-39615518 Glycine max
Glyma.06G240100 0.5kb upstream 0.5kb upstream 500 false Chr06: 39596483-39596982 Glycine max
Glyma.06G240100 0.5kb downstream 0.5kb downstream 19036 true Chr06: 39596983-39616018 Glycine max
Glyma.06G240100 0.5kb downstream 0.5kb downstream 500 false Chr06: 39615519-39616018 Glycine max
Glyma.06G240100 1.0kb upstream 1.0kb upstream 19536 true Chr06: 39595983-39615518 Glycine max
Glyma.06G240100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39595983-39596982 Glycine max
Glyma.06G240100 1.0kb downstream 1.0kb downstream 19536 true Chr06: 39596983-39616518 Glycine max
Glyma.06G240100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39615519-39616518 Glycine max
Glyma.06G240100 2.0kb upstream 2.0kb upstream 20536 true Chr06: 39594983-39615518 Glycine max
Glyma.06G240100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39594983-39596982 Glycine max
Glyma.06G240100 2.0kb downstream 2.0kb downstream 20536 true Chr06: 39596983-39617518 Glycine max
Glyma.06G240100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39615519-39617518 Glycine max
Glyma.06G240100 5.0kb upstream 5.0kb upstream 23536 true Chr06: 39591983-39615518 Glycine max
Glyma.06G240100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39591983-39596982 Glycine max
Glyma.06G240100 5.0kb downstream 5.0kb downstream 23536 true Chr06: 39596983-39620518 Glycine max
Glyma.06G240100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39615519-39620518 Glycine max
Glyma.06G240100 10.0kb upstream 10.0kb upstream 28536 true Chr06: 39586983-39615518 Glycine max
Glyma.06G240100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39586983-39596982 Glycine max
Glyma.06G240100 10.0kb downstream 10.0kb downstream 28536 true Chr06: 39596983-39625518 Glycine max
Glyma.06G240100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39615519-39625518 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122239693 5265 Fabidae Singleton cluster - no MSA
124067379 5270 Rosid View MSA
123736573 5271 Pentapetalae View MSA
122786615 5272 Eudicot View MSA
122042020 5273 Angiosperm View MSA
121345843 5274 Embryophyte View MSA
123425019 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.0637 0.0 33.8678    
cufflinks 12.0752 0.0 36.6031    
cufflinks 14.9323 0.0 55.1254   High
cufflinks 12.3132 0.0 37.1699    
cufflinks 10.6125 0.0 41.7155   Low
cufflinks 14.8516 0.0 44.501   High
cufflinks 15.1754 0.0 45.2203   High
cufflinks 12.4094 0.0 57.1305    
cufflinks 11.3806 0.0 42.8743    
cufflinks 0.607        
cufflinks 0.227       Low
cufflinks 0.682       High
cufflinks 0.67       High
cufflinks 0.558        
cufflinks 0.24       Low
cufflinks 0.394        
cufflinks 0.548        
cufflinks 0.704       High
cufflinks 0.641        
cufflinks 0.412        
cufflinks 0.287       Low
cufflinks 0.44        
cufflinks 0.538        
cufflinks 0.297       Low
cufflinks 0.399        
cufflinks 0.378        

0 Strain