Gene : Glyma.06G240300 G. max Wm82.a2.v1
Defline:  (1 of 75) PF05678 - VQ motif (VQ) Genomic Order:  2403
Name:  ? Glyma.06G240300 Secondary Identifier:  ? PAC:30552246
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G240300 0.5kb upstream 0.5kb upstream 2363 true Chr06: 39620687-39623049 Glycine max
Glyma.06G240300 0.5kb upstream 0.5kb upstream 500 false Chr06: 39622550-39623049 Glycine max
Glyma.06G240300 0.5kb downstream 0.5kb downstream 2363 true Chr06: 39620187-39622549 Glycine max
Glyma.06G240300 0.5kb downstream 0.5kb downstream 500 false Chr06: 39620187-39620686 Glycine max
Glyma.06G240300 1.0kb upstream 1.0kb upstream 2863 true Chr06: 39620687-39623549 Glycine max
Glyma.06G240300 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39622550-39623549 Glycine max
Glyma.06G240300 1.0kb downstream 1.0kb downstream 2863 true Chr06: 39619687-39622549 Glycine max
Glyma.06G240300 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39619687-39620686 Glycine max
Glyma.06G240300 2.0kb upstream 2.0kb upstream 3863 true Chr06: 39620687-39624549 Glycine max
Glyma.06G240300 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39622550-39624549 Glycine max
Glyma.06G240300 2.0kb downstream 2.0kb downstream 3863 true Chr06: 39618687-39622549 Glycine max
Glyma.06G240300 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39618687-39620686 Glycine max
Glyma.06G240300 5.0kb upstream 5.0kb upstream 6863 true Chr06: 39620687-39627549 Glycine max
Glyma.06G240300 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39622550-39627549 Glycine max
Glyma.06G240300 5.0kb downstream 5.0kb downstream 6863 true Chr06: 39615687-39622549 Glycine max
Glyma.06G240300 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39615687-39620686 Glycine max
Glyma.06G240300 10.0kb upstream 10.0kb upstream 11863 true Chr06: 39620687-39632549 Glycine max
Glyma.06G240300 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39622550-39632549 Glycine max
Glyma.06G240300 10.0kb downstream 10.0kb downstream 11863 true Chr06: 39610687-39622549 Glycine max
Glyma.06G240300 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39610687-39620686 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311492 5265 Fabidae View MSA
124073802 5270 Rosid View MSA
123750842 5271 Pentapetalae View MSA
122795090 5272 Eudicot View MSA
122046673 5273 Angiosperm View MSA
121347985 5274 Embryophyte View MSA
123380701 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.90892 0.0 14.4874    
cufflinks 10.3849 0.0 28.308    
cufflinks 3.2611 0.0 10.1428   Low
cufflinks 5.16474 0.0 15.047    
cufflinks 14.091 0.0 37.8452    
cufflinks 17.1643 0.0 45.8539    
cufflinks 6.2068 0.0 17.756    
cufflinks 24.7393 0.0 66.2256 High High
cufflinks 17.4433 0.0 46.5765    
cufflinks 8.949     High High
cufflinks 3.648        
cufflinks 2.189        
cufflinks 7.563     High High
cufflinks 6.218        
cufflinks 5.316     High  
cufflinks 1.533        
cufflinks 0.671       Low
cufflinks 2.051        
cufflinks 6.956       High
cufflinks 1.099       Low
cufflinks 3.603        
cufflinks 1.849        
cufflinks 1.929        
cufflinks 6.295     High High
cufflinks 1.597        
cufflinks 2.466        

0 Strain