Gene : Glyma.06G242900 G. max Wm82.a2.v1
Genomic Order:  2429 Name:  ? Glyma.06G242900
Secondary Identifier:  ? PAC:30549336
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G242900 0.5kb upstream 0.5kb upstream 1960 true Chr06: 40400010-40401969 Glycine max
Glyma.06G242900 0.5kb upstream 0.5kb upstream 500 false Chr06: 40401470-40401969 Glycine max
Glyma.06G242900 0.5kb downstream 0.5kb downstream 1960 true Chr06: 40399510-40401469 Glycine max
Glyma.06G242900 0.5kb downstream 0.5kb downstream 500 false Chr06: 40399510-40400009 Glycine max
Glyma.06G242900 1.0kb upstream 1.0kb upstream 2460 true Chr06: 40400010-40402469 Glycine max
Glyma.06G242900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 40401470-40402469 Glycine max
Glyma.06G242900 1.0kb downstream 1.0kb downstream 2460 true Chr06: 40399010-40401469 Glycine max
Glyma.06G242900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 40399010-40400009 Glycine max
Glyma.06G242900 2.0kb upstream 2.0kb upstream 3460 true Chr06: 40400010-40403469 Glycine max
Glyma.06G242900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 40401470-40403469 Glycine max
Glyma.06G242900 2.0kb downstream 2.0kb downstream 3460 true Chr06: 40398010-40401469 Glycine max
Glyma.06G242900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 40398010-40400009 Glycine max
Glyma.06G242900 5.0kb upstream 5.0kb upstream 6460 true Chr06: 40400010-40406469 Glycine max
Glyma.06G242900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 40401470-40406469 Glycine max
Glyma.06G242900 5.0kb downstream 5.0kb downstream 6460 true Chr06: 40395010-40401469 Glycine max
Glyma.06G242900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 40395010-40400009 Glycine max
Glyma.06G242900 10.0kb upstream 10.0kb upstream 11460 true Chr06: 40400010-40411469 Glycine max
Glyma.06G242900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 40401470-40411469 Glycine max
Glyma.06G242900 10.0kb downstream 10.0kb downstream 11460 true Chr06: 40390010-40401469 Glycine max
Glyma.06G242900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 40390010-40400009 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310687 5265 Fabidae View MSA
124063118 5270 Rosid View MSA
123739820 5271 Pentapetalae View MSA
122795502 5272 Eudicot View MSA
122049749 5273 Angiosperm View MSA
121311572 5274 Embryophyte View MSA
123348850 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1248.73 0.0 17157.4 High High
cufflinks 105.668 0.0 418.334 High  
cufflinks 900.253 0.0 9817.2 High  
cufflinks 180.168 0.0 733.054 High  
cufflinks 213.227 0.0 910.8 High  
cufflinks 13.743 0.0 46.6212   Low
cufflinks 19.2727 0.0 73.4205   Low
cufflinks 1503.73 0.0 25377.5 High High
cufflinks 213.535 0.0 921.168 High  
cufflinks 39.155     High  
cufflinks 14.227     High  
cufflinks 325.018     High High
cufflinks 1.939       Low
cufflinks 1.105       Low
cufflinks 0.093       Low
cufflinks 20.224     High  
cufflinks 67.747     High  
cufflinks 125.172     High High
cufflinks 12.566     High  
cufflinks 40.558     High  
cufflinks 13.032     High  
cufflinks 32.585     High  
cufflinks 8.96     High  
cufflinks 3.521        
cufflinks 38.18     High  
cufflinks 15.372     High  

0 Strain