Gene : Glyma.06G249600 G. max Wm82.a2.v1
Genomic Order:  2496 Name:  ? Glyma.06G249600
Secondary Identifier:  ? PAC:30552138
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G249600 0.5kb upstream 0.5kb upstream 1253 true Chr06: 42156509-42157761 Glycine max
Glyma.06G249600 0.5kb upstream 0.5kb upstream 500 false Chr06: 42156509-42157008 Glycine max
Glyma.06G249600 0.5kb downstream 0.5kb downstream 1253 true Chr06: 42157009-42158261 Glycine max
Glyma.06G249600 0.5kb downstream 0.5kb downstream 500 false Chr06: 42157762-42158261 Glycine max
Glyma.06G249600 1.0kb upstream 1.0kb upstream 1753 true Chr06: 42156009-42157761 Glycine max
Glyma.06G249600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 42156009-42157008 Glycine max
Glyma.06G249600 1.0kb downstream 1.0kb downstream 1753 true Chr06: 42157009-42158761 Glycine max
Glyma.06G249600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 42157762-42158761 Glycine max
Glyma.06G249600 2.0kb upstream 2.0kb upstream 2753 true Chr06: 42155009-42157761 Glycine max
Glyma.06G249600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 42155009-42157008 Glycine max
Glyma.06G249600 2.0kb downstream 2.0kb downstream 2753 true Chr06: 42157009-42159761 Glycine max
Glyma.06G249600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 42157762-42159761 Glycine max
Glyma.06G249600 5.0kb upstream 5.0kb upstream 5753 true Chr06: 42152009-42157761 Glycine max
Glyma.06G249600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 42152009-42157008 Glycine max
Glyma.06G249600 5.0kb downstream 5.0kb downstream 5753 true Chr06: 42157009-42162761 Glycine max
Glyma.06G249600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 42157762-42162761 Glycine max
Glyma.06G249600 10.0kb upstream 10.0kb upstream 10753 true Chr06: 42147009-42157761 Glycine max
Glyma.06G249600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 42147009-42157008 Glycine max
Glyma.06G249600 10.0kb downstream 10.0kb downstream 10753 true Chr06: 42157009-42167761 Glycine max
Glyma.06G249600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 42157762-42167761 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309967 5265 Fabidae View MSA
124074706 5270 Rosid View MSA
123747568 5271 Pentapetalae View MSA
122796436 5272 Eudicot View MSA
122046869 5273 Angiosperm View MSA
121346606 5274 Embryophyte View MSA
123380413 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.95736 0.0 10.5231    
cufflinks 0.457922 0.0 1.78944    
cufflinks 5.5003 0.0 18.3991   High
cufflinks 0.900303 0.0 3.41469    
cufflinks 0.629095 0.0 2.42541    
cufflinks 7.3434 0.0 23.641   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.508607 0.0 1.97966    
cufflinks 0.313033 0.0 1.24011   Low
cufflinks 0.712        
cufflinks 2.555        
cufflinks 4.599       High
cufflinks 1.544        
cufflinks 0.096       Low
cufflinks 0.185       Low
cufflinks 0.802        
cufflinks 4.521       High
cufflinks 2.255        
cufflinks 0.775        
cufflinks 0.448        
cufflinks 1.524        
cufflinks 0.627        
cufflinks 1.208        
cufflinks 2.673        
cufflinks 0.507        
cufflinks 3.408       High

0 Strain