Gene : Glyma.06G235500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR11751:SF387 - AMINOTRANSFERASE TAT2-RELATED Genomic Order:  2354
Name:  ? Glyma.06G235500 Secondary Identifier:  ? PAC:30549883
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G235500 0.5kb upstream 0.5kb upstream 14087 true Chr06: 38106249-38120335 Glycine max
Glyma.06G235500 0.5kb upstream 0.5kb upstream 500 false Chr06: 38119836-38120335 Glycine max
Glyma.06G235500 0.5kb downstream 0.5kb downstream 14087 true Chr06: 38105749-38119835 Glycine max
Glyma.06G235500 0.5kb downstream 0.5kb downstream 500 false Chr06: 38105749-38106248 Glycine max
Glyma.06G235500 1.0kb upstream 1.0kb upstream 14587 true Chr06: 38106249-38120835 Glycine max
Glyma.06G235500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 38119836-38120835 Glycine max
Glyma.06G235500 1.0kb downstream 1.0kb downstream 14587 true Chr06: 38105249-38119835 Glycine max
Glyma.06G235500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 38105249-38106248 Glycine max
Glyma.06G235500 2.0kb upstream 2.0kb upstream 15587 true Chr06: 38106249-38121835 Glycine max
Glyma.06G235500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 38119836-38121835 Glycine max
Glyma.06G235500 2.0kb downstream 2.0kb downstream 15587 true Chr06: 38104249-38119835 Glycine max
Glyma.06G235500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 38104249-38106248 Glycine max
Glyma.06G235500 5.0kb upstream 5.0kb upstream 18587 true Chr06: 38106249-38124835 Glycine max
Glyma.06G235500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 38119836-38124835 Glycine max
Glyma.06G235500 5.0kb downstream 5.0kb downstream 18587 true Chr06: 38101249-38119835 Glycine max
Glyma.06G235500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 38101249-38106248 Glycine max
Glyma.06G235500 10.0kb upstream 10.0kb upstream 23587 true Chr06: 38106249-38129835 Glycine max
Glyma.06G235500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 38119836-38129835 Glycine max
Glyma.06G235500 10.0kb downstream 10.0kb downstream 23587 true Chr06: 38096249-38119835 Glycine max
Glyma.06G235500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 38096249-38106248 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302326 5265 Fabidae View MSA
124063132 5270 Rosid View MSA
123742596 5271 Pentapetalae View MSA
122795476 5272 Eudicot View MSA
122051547 5273 Angiosperm View MSA
121351636 5274 Embryophyte View MSA
123426927 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.0882 0.0 133.607 High  
cufflinks 9.29488 0.0 40.979    
cufflinks 324.888 0.0 4976.09 High High
cufflinks 1.37817 0.0 10.5212   Low
cufflinks 7.30103 0.0 33.2572    
cufflinks 4.59417 0.0 20.9884    
cufflinks 8.06733 0.0 31.8669    
cufflinks 2.3149 0.0 15.1148    
cufflinks 11.6958 0.0 50.0921    
cufflinks 0.026     Low Low
cufflinks 4.501       High
cufflinks 4.987       High
cufflinks 0.092     Low  
cufflinks 0.272        
cufflinks 5.836     High High
cufflinks 0.613        
cufflinks 0.015     Low Low
cufflinks 0.587        
cufflinks 0.334        
cufflinks 1.164        
cufflinks 0.78        
cufflinks 0.389        
cufflinks 0.113        
cufflinks 5.141       High
cufflinks 0.976        
cufflinks 0.34        

0 Strain