Gene : Glyma.06G236400 G. max Wm82.a2.v1
Defline:  (1 of 354) PF00847 - AP2 domain (AP2) Genomic Order:  2364
Name:  ? Glyma.06G236400 Secondary Identifier:  ? PAC:30550197
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G236400 0.5kb upstream 0.5kb upstream 1656 true Chr06: 38471642-38473297 Glycine max
Glyma.06G236400 0.5kb upstream 0.5kb upstream 500 false Chr06: 38471642-38472141 Glycine max
Glyma.06G236400 0.5kb downstream 0.5kb downstream 1656 true Chr06: 38472142-38473797 Glycine max
Glyma.06G236400 0.5kb downstream 0.5kb downstream 500 false Chr06: 38473298-38473797 Glycine max
Glyma.06G236400 1.0kb upstream 1.0kb upstream 2156 true Chr06: 38471142-38473297 Glycine max
Glyma.06G236400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 38471142-38472141 Glycine max
Glyma.06G236400 1.0kb downstream 1.0kb downstream 2156 true Chr06: 38472142-38474297 Glycine max
Glyma.06G236400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 38473298-38474297 Glycine max
Glyma.06G236400 2.0kb upstream 2.0kb upstream 3156 true Chr06: 38470142-38473297 Glycine max
Glyma.06G236400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 38470142-38472141 Glycine max
Glyma.06G236400 2.0kb downstream 2.0kb downstream 3156 true Chr06: 38472142-38475297 Glycine max
Glyma.06G236400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 38473298-38475297 Glycine max
Glyma.06G236400 5.0kb upstream 5.0kb upstream 6156 true Chr06: 38467142-38473297 Glycine max
Glyma.06G236400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 38467142-38472141 Glycine max
Glyma.06G236400 5.0kb downstream 5.0kb downstream 6156 true Chr06: 38472142-38478297 Glycine max
Glyma.06G236400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 38473298-38478297 Glycine max
Glyma.06G236400 10.0kb upstream 10.0kb upstream 11156 true Chr06: 38462142-38473297 Glycine max
Glyma.06G236400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 38462142-38472141 Glycine max
Glyma.06G236400 10.0kb downstream 10.0kb downstream 11156 true Chr06: 38472142-38483297 Glycine max
Glyma.06G236400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 38473298-38483297 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300094 5265 Fabidae View MSA
124071408 5270 Rosid View MSA
123744061 5271 Pentapetalae View MSA
122791719 5272 Eudicot View MSA
122049614 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.67523 0.0 20.1743   High
cufflinks 4.63073 0.0 14.8306    
cufflinks 3.18454 0.0 10.8168   Low
cufflinks 2.88452 0.0 9.80989   Low
cufflinks 6.44759 0.0 19.372   High
cufflinks 4.38794 0.0 14.0315    
cufflinks 5.57698 0.0 17.1853    
cufflinks 3.56385 0.0 11.8169    
cufflinks 6.56753 0.0 19.8708   High
cufflinks 6.474        
cufflinks 5.944     High  
cufflinks 7.073        
cufflinks 5.214        
cufflinks 1.162       Low
cufflinks 11.41     High High
cufflinks 5.452        
cufflinks 30.551     High High
cufflinks 9.933     High  
cufflinks 2.102       Low
cufflinks 4.358        
cufflinks 2.278        
cufflinks 3.293        
cufflinks 2.793        
cufflinks 3.115        
cufflinks 1.888       Low
cufflinks 6.444     High  

0 Strain