Gene : Glyma.06G236900 G. max Wm82.a2.v1
Defline:  (1 of 217) PF05699 - hAT family C-terminal dimerisation region (Dimer_Tnp_hAT) Genomic Order:  2369
Name:  ? Glyma.06G236900 Secondary Identifier:  ? PAC:30551048
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G236900 0.5kb upstream 0.5kb upstream 5547 true Chr06: 38652235-38657781 Glycine max
Glyma.06G236900 0.5kb upstream 0.5kb upstream 500 false Chr06: 38652235-38652734 Glycine max
Glyma.06G236900 0.5kb downstream 0.5kb downstream 5547 true Chr06: 38652735-38658281 Glycine max
Glyma.06G236900 0.5kb downstream 0.5kb downstream 500 false Chr06: 38657782-38658281 Glycine max
Glyma.06G236900 1.0kb upstream 1.0kb upstream 6047 true Chr06: 38651735-38657781 Glycine max
Glyma.06G236900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 38651735-38652734 Glycine max
Glyma.06G236900 1.0kb downstream 1.0kb downstream 6047 true Chr06: 38652735-38658781 Glycine max
Glyma.06G236900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 38657782-38658781 Glycine max
Glyma.06G236900 2.0kb upstream 2.0kb upstream 7047 true Chr06: 38650735-38657781 Glycine max
Glyma.06G236900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 38650735-38652734 Glycine max
Glyma.06G236900 2.0kb downstream 2.0kb downstream 7047 true Chr06: 38652735-38659781 Glycine max
Glyma.06G236900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 38657782-38659781 Glycine max
Glyma.06G236900 5.0kb upstream 5.0kb upstream 10047 true Chr06: 38647735-38657781 Glycine max
Glyma.06G236900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 38647735-38652734 Glycine max
Glyma.06G236900 5.0kb downstream 5.0kb downstream 10047 true Chr06: 38652735-38662781 Glycine max
Glyma.06G236900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 38657782-38662781 Glycine max
Glyma.06G236900 10.0kb upstream 10.0kb upstream 15047 true Chr06: 38642735-38657781 Glycine max
Glyma.06G236900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 38642735-38652734 Glycine max
Glyma.06G236900 10.0kb downstream 10.0kb downstream 15047 true Chr06: 38652735-38667781 Glycine max
Glyma.06G236900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 38657782-38667781 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122250314 5265 Fabidae View MSA
124038186 5270 Rosid View MSA
123753095 5271 Pentapetalae View MSA
122774950 5272 Eudicot View MSA
122051703 5273 Angiosperm View MSA
121347820 5274 Embryophyte View MSA
123428458 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.66746 0.0 3.01902    
cufflinks 1.84154 0.0 7.25933   High
cufflinks 0.366672 0.0 1.89601   Low
cufflinks 0.438811 0.0 2.26316    
cufflinks 0.91784 0.0 4.28032    
cufflinks 0.550725 0.0 2.65472    
cufflinks 0.965988 0.0 4.43356    
cufflinks 0.501792 0.0 2.55666    
cufflinks 0.837614 0.0 4.0144    
cufflinks 0.073     Low Low
cufflinks 0.094        
cufflinks 0.109     Low  
cufflinks 0.304       High
cufflinks 0.236        
cufflinks 0.18        
cufflinks 0.381       High
cufflinks 0.065     Low Low
cufflinks 0.171        
cufflinks 0.427       High
cufflinks 0.194        
cufflinks 0.051     Low Low
cufflinks 0.26        
cufflinks 0.256        
cufflinks 0.113        
cufflinks 0.191        
cufflinks 0.067       Low

0 Strain