Gene : Glyma.06G238900 G. max Wm82.a2.v1
Defline:  (1 of 2) 1.1.1.157 - 3-hydroxybutyryl-CoA dehydrogenase / BHBD Genomic Order:  2389
Name:  ? Glyma.06G238900 Secondary Identifier:  ? PAC:30550561
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G238900 0.5kb upstream 0.5kb upstream 3137 true Chr06: 39107018-39110154 Glycine max
Glyma.06G238900 0.5kb upstream 0.5kb upstream 500 false Chr06: 39107018-39107517 Glycine max
Glyma.06G238900 0.5kb downstream 0.5kb downstream 3137 true Chr06: 39107518-39110654 Glycine max
Glyma.06G238900 0.5kb downstream 0.5kb downstream 500 false Chr06: 39110155-39110654 Glycine max
Glyma.06G238900 1.0kb upstream 1.0kb upstream 3637 true Chr06: 39106518-39110154 Glycine max
Glyma.06G238900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 39106518-39107517 Glycine max
Glyma.06G238900 1.0kb downstream 1.0kb downstream 3637 true Chr06: 39107518-39111154 Glycine max
Glyma.06G238900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 39110155-39111154 Glycine max
Glyma.06G238900 2.0kb upstream 2.0kb upstream 4637 true Chr06: 39105518-39110154 Glycine max
Glyma.06G238900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 39105518-39107517 Glycine max
Glyma.06G238900 2.0kb downstream 2.0kb downstream 4637 true Chr06: 39107518-39112154 Glycine max
Glyma.06G238900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 39110155-39112154 Glycine max
Glyma.06G238900 5.0kb upstream 5.0kb upstream 7637 true Chr06: 39102518-39110154 Glycine max
Glyma.06G238900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 39102518-39107517 Glycine max
Glyma.06G238900 5.0kb downstream 5.0kb downstream 7637 true Chr06: 39107518-39115154 Glycine max
Glyma.06G238900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 39110155-39115154 Glycine max
Glyma.06G238900 10.0kb upstream 10.0kb upstream 12637 true Chr06: 39097518-39110154 Glycine max
Glyma.06G238900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 39097518-39107517 Glycine max
Glyma.06G238900 10.0kb downstream 10.0kb downstream 12637 true Chr06: 39107518-39120154 Glycine max
Glyma.06G238900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 39110155-39120154 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308388 5265 Fabidae View MSA
124065161 5270 Rosid View MSA
123739736 5271 Pentapetalae View MSA
122788599 5272 Eudicot View MSA
122042750 5273 Angiosperm View MSA
121344136 5274 Embryophyte View MSA
123426191 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.21275 0.0 4.53507   High
cufflinks 0.119458 0.0 0.49369 Low Low
cufflinks 1.07669 0.0 4.0494   High
cufflinks 0.6107 0.0 2.35424    
cufflinks 0.127727 0.0 0.523789 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.198245 0.0 0.797319 Low  
cufflinks 0.383865 0.0 1.50823    
cufflinks 0.117593 0.0 0.485791 Low Low
cufflinks 0.283        
cufflinks 0.738       High
cufflinks 0.376        
cufflinks 0.024     Low Low
cufflinks 0.025     Low Low
cufflinks 0.087        
cufflinks 0.193        
cufflinks 0.049     Low Low
cufflinks 0.084     Low  
cufflinks 0.159        
cufflinks 0.434       High
cufflinks 0.153        
cufflinks 0.244        
cufflinks 0.203        
cufflinks 0.528       High
cufflinks 0.294        
cufflinks 0.068        

0 Strain