Gene : PhHAL.6G022000 P. hallii HAL v2.1

Defline:  (1 of 2) PTHR33372//PTHR33372:SF1 - FAMILY NOT NAMED // CHLOROPLAST J-LIKE DOMAIN 1-CONTAINING PROTEIN Genomic Order:  209
Name:  ? PhHAL.6G022000 Secondary Identifier:  ? PAC:40391759

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.6G022000 0.5kb upstream 0.5kb upstream 4533 true Chr06: 1576813-1581345 Panicum hallii HAL
PhHAL.6G022000 0.5kb upstream 0.5kb upstream 500 false Chr06: 1580846-1581345 Panicum hallii HAL
PhHAL.6G022000 0.5kb downstream 0.5kb downstream 4533 true Chr06: 1576313-1580845 Panicum hallii HAL
PhHAL.6G022000 0.5kb downstream 0.5kb downstream 500 false Chr06: 1576313-1576812 Panicum hallii HAL
PhHAL.6G022000 1.0kb upstream 1.0kb upstream 5033 true Chr06: 1576813-1581845 Panicum hallii HAL
PhHAL.6G022000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1580846-1581845 Panicum hallii HAL
PhHAL.6G022000 1.0kb downstream 1.0kb downstream 5033 true Chr06: 1575813-1580845 Panicum hallii HAL
PhHAL.6G022000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1575813-1576812 Panicum hallii HAL
PhHAL.6G022000 2.0kb upstream 2.0kb upstream 6033 true Chr06: 1576813-1582845 Panicum hallii HAL
PhHAL.6G022000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1580846-1582845 Panicum hallii HAL
PhHAL.6G022000 2.0kb downstream 2.0kb downstream 6033 true Chr06: 1574813-1580845 Panicum hallii HAL
PhHAL.6G022000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1574813-1576812 Panicum hallii HAL
PhHAL.6G022000 5.0kb upstream 5.0kb upstream 9033 true Chr06: 1576813-1585845 Panicum hallii HAL
PhHAL.6G022000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1580846-1585845 Panicum hallii HAL
PhHAL.6G022000 5.0kb downstream 5.0kb downstream 9033 true Chr06: 1571813-1580845 Panicum hallii HAL
PhHAL.6G022000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1571813-1576812 Panicum hallii HAL
PhHAL.6G022000 10.0kb upstream 10.0kb upstream 14033 true Chr06: 1576813-1590845 Panicum hallii HAL
PhHAL.6G022000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1580846-1590845 Panicum hallii HAL
PhHAL.6G022000 10.0kb downstream 10.0kb downstream 14033 true Chr06: 1566813-1580845 Panicum hallii HAL
PhHAL.6G022000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1566813-1576812 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184126 5267 Panicoideae View MSA
124588818 5269 Grass View MSA
122045556 5273 Angiosperm View MSA
121344488 5274 Embryophyte View MSA
123428806 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier