Gene : Glyma.06G229100 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12083 - POLYNUCLEOTIDE KINASE- 3'-PHOSPHATASE Genomic Order:  2291
Name:  ? Glyma.06G229100 Secondary Identifier:  ? PAC:30553132
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G229100 0.5kb upstream 0.5kb upstream 6228 true Chr06: 34872890-34879117 Glycine max
Glyma.06G229100 0.5kb upstream 0.5kb upstream 500 false Chr06: 34878618-34879117 Glycine max
Glyma.06G229100 0.5kb downstream 0.5kb downstream 6228 true Chr06: 34872390-34878617 Glycine max
Glyma.06G229100 0.5kb downstream 0.5kb downstream 500 false Chr06: 34872390-34872889 Glycine max
Glyma.06G229100 1.0kb upstream 1.0kb upstream 6728 true Chr06: 34872890-34879617 Glycine max
Glyma.06G229100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 34878618-34879617 Glycine max
Glyma.06G229100 1.0kb downstream 1.0kb downstream 6728 true Chr06: 34871890-34878617 Glycine max
Glyma.06G229100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 34871890-34872889 Glycine max
Glyma.06G229100 2.0kb upstream 2.0kb upstream 7728 true Chr06: 34872890-34880617 Glycine max
Glyma.06G229100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 34878618-34880617 Glycine max
Glyma.06G229100 2.0kb downstream 2.0kb downstream 7728 true Chr06: 34870890-34878617 Glycine max
Glyma.06G229100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 34870890-34872889 Glycine max
Glyma.06G229100 5.0kb upstream 5.0kb upstream 10728 true Chr06: 34872890-34883617 Glycine max
Glyma.06G229100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 34878618-34883617 Glycine max
Glyma.06G229100 5.0kb downstream 5.0kb downstream 10728 true Chr06: 34867890-34878617 Glycine max
Glyma.06G229100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 34867890-34872889 Glycine max
Glyma.06G229100 10.0kb upstream 10.0kb upstream 15728 true Chr06: 34872890-34888617 Glycine max
Glyma.06G229100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 34878618-34888617 Glycine max
Glyma.06G229100 10.0kb downstream 10.0kb downstream 15728 true Chr06: 34862890-34878617 Glycine max
Glyma.06G229100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 34862890-34872889 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121610768 5273 Angiosperm Singleton cluster - no MSA
122243583 5265 Fabidae Singleton cluster - no MSA
123988072 5270 Rosid Singleton cluster - no MSA
123563288 5271 Pentapetalae Singleton cluster - no MSA
122598067 5272 Eudicot Singleton cluster - no MSA
120883007 5274 Embryophyte Singleton cluster - no MSA
123426265 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.43731 0.0 5.1348    
cufflinks 1.99967 0.0 6.94491    
cufflinks 0.750747 0.0 2.78183    
cufflinks 1.06144 0.0 3.8615    
cufflinks 19.226 0.0 51.7914   High
cufflinks 1.61397 0.0 5.71455    
cufflinks 1.22615 0.0 4.42896    
cufflinks 0.95713 0.0 3.50312    
cufflinks 48.2862 0.0 130.583 High High
cufflinks 0.316        
cufflinks 0.187        
cufflinks 0.404        
cufflinks 0.491        
cufflinks 0.82        
cufflinks 20.18     High High
cufflinks 0.381        
cufflinks 0.265        
cufflinks 0.538        
cufflinks 0.709        
cufflinks 0.407        
cufflinks 0.126       Low
cufflinks 0.441        
cufflinks 0.59        
cufflinks 0.153        
cufflinks 0.479        
cufflinks 0.253        

0 Strain