Gene : PhHAL.6G026400 P. hallii HAL v2.1
Defline:  (1 of 1) K01696 - tryptophan synthase beta chain (trpB) Genomic Order:  253
Name:  ? PhHAL.6G026400 Secondary Identifier:  ? PAC:40393918
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3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-4161 Panicum hallii HAL pathologic  
PhalliiHAL PWY-6949 Panicum hallii HAL pathologic  
PhalliiHAL TRPSYN-PWY Panicum hallii HAL pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.6G026400 0.5kb upstream 0.5kb upstream 3661 true Chr06: 1798217-1801877 Panicum hallii HAL
PhHAL.6G026400 0.5kb upstream 0.5kb upstream 500 false Chr06: 1798217-1798716 Panicum hallii HAL
PhHAL.6G026400 0.5kb downstream 0.5kb downstream 3661 true Chr06: 1798717-1802377 Panicum hallii HAL
PhHAL.6G026400 0.5kb downstream 0.5kb downstream 500 false Chr06: 1801878-1802377 Panicum hallii HAL
PhHAL.6G026400 1.0kb upstream 1.0kb upstream 4161 true Chr06: 1797717-1801877 Panicum hallii HAL
PhHAL.6G026400 1.0kb upstream 1.0kb upstream 1000 false Chr06: 1797717-1798716 Panicum hallii HAL
PhHAL.6G026400 1.0kb downstream 1.0kb downstream 4161 true Chr06: 1798717-1802877 Panicum hallii HAL
PhHAL.6G026400 1.0kb downstream 1.0kb downstream 1000 false Chr06: 1801878-1802877 Panicum hallii HAL
PhHAL.6G026400 2.0kb upstream 2.0kb upstream 5161 true Chr06: 1796717-1801877 Panicum hallii HAL
PhHAL.6G026400 2.0kb upstream 2.0kb upstream 2000 false Chr06: 1796717-1798716 Panicum hallii HAL
PhHAL.6G026400 2.0kb downstream 2.0kb downstream 5161 true Chr06: 1798717-1803877 Panicum hallii HAL
PhHAL.6G026400 2.0kb downstream 2.0kb downstream 2000 false Chr06: 1801878-1803877 Panicum hallii HAL
PhHAL.6G026400 5.0kb upstream 5.0kb upstream 8161 true Chr06: 1793717-1801877 Panicum hallii HAL
PhHAL.6G026400 5.0kb upstream 5.0kb upstream 5000 false Chr06: 1793717-1798716 Panicum hallii HAL
PhHAL.6G026400 5.0kb downstream 5.0kb downstream 8161 true Chr06: 1798717-1806877 Panicum hallii HAL
PhHAL.6G026400 5.0kb downstream 5.0kb downstream 5000 false Chr06: 1801878-1806877 Panicum hallii HAL
PhHAL.6G026400 10.0kb upstream 10.0kb upstream 13161 true Chr06: 1788717-1801877 Panicum hallii HAL
PhHAL.6G026400 10.0kb upstream 10.0kb upstream 10000 false Chr06: 1788717-1798716 Panicum hallii HAL
PhHAL.6G026400 10.0kb downstream 10.0kb downstream 13161 true Chr06: 1798717-1811877 Panicum hallii HAL
PhHAL.6G026400 10.0kb downstream 10.0kb downstream 10000 false Chr06: 1801878-1811877 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191160 5267 Panicoideae View MSA
124577172 5269 Grass View MSA
122044231 5273 Angiosperm View MSA
121344651 5274 Embryophyte View MSA
123423776 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier