Gene : Glyma.06G291900 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13935:SF53 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2919
Name:  ? Glyma.06G291900 Secondary Identifier:  ? PAC:30552234
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G291900 0.5kb upstream 0.5kb upstream 1878 true Chr06: 48052481-48054358 Glycine max
Glyma.06G291900 0.5kb upstream 0.5kb upstream 500 false Chr06: 48053859-48054358 Glycine max
Glyma.06G291900 0.5kb downstream 0.5kb downstream 1878 true Chr06: 48051981-48053858 Glycine max
Glyma.06G291900 0.5kb downstream 0.5kb downstream 500 false Chr06: 48051981-48052480 Glycine max
Glyma.06G291900 1.0kb upstream 1.0kb upstream 2378 true Chr06: 48052481-48054858 Glycine max
Glyma.06G291900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48053859-48054858 Glycine max
Glyma.06G291900 1.0kb downstream 1.0kb downstream 2378 true Chr06: 48051481-48053858 Glycine max
Glyma.06G291900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48051481-48052480 Glycine max
Glyma.06G291900 2.0kb upstream 2.0kb upstream 3378 true Chr06: 48052481-48055858 Glycine max
Glyma.06G291900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48053859-48055858 Glycine max
Glyma.06G291900 2.0kb downstream 2.0kb downstream 3378 true Chr06: 48050481-48053858 Glycine max
Glyma.06G291900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48050481-48052480 Glycine max
Glyma.06G291900 5.0kb upstream 5.0kb upstream 6378 true Chr06: 48052481-48058858 Glycine max
Glyma.06G291900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48053859-48058858 Glycine max
Glyma.06G291900 5.0kb downstream 5.0kb downstream 6378 true Chr06: 48047481-48053858 Glycine max
Glyma.06G291900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48047481-48052480 Glycine max
Glyma.06G291900 10.0kb upstream 10.0kb upstream 11378 true Chr06: 48052481-48063858 Glycine max
Glyma.06G291900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48053859-48063858 Glycine max
Glyma.06G291900 10.0kb downstream 10.0kb downstream 11378 true Chr06: 48042481-48053858 Glycine max
Glyma.06G291900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48042481-48052480 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122308200 5265 Fabidae View MSA
124070825 5270 Rosid View MSA
123745471 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.9912 0.0 7.0713   High
cufflinks 0.0247592 0.0 0.112284 Low  
cufflinks 0.110397 0.0 0.447545 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.048451 0.0 0.207638 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 14.017     High High
cufflinks 0.202        
cufflinks 0.327        
cufflinks 0.137        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.039     Low Low
cufflinks 0.058     Low  
cufflinks 6.07       High
cufflinks 0.287        
cufflinks 0.371        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.102        
cufflinks 0.068     Low  
cufflinks 3.65       High
cufflinks 0.365        
cufflinks 0.043     Low Low
cufflinks 0.723        

0 Strain