Gene : Glyma.06G292500 G. max Wm82.a2.v1
Defline:  (1 of 3) PTHR12741:SF14 - CALLOSE SYNTHASE 12 Genomic Order:  2925
Name:  ? Glyma.06G292500 Secondary Identifier:  ? PAC:30552686
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Gmax PWY-6773 Glycine max pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G292500 0.5kb upstream 0.5kb upstream 5459 true Chr06: 48137063-48142521 Glycine max
Glyma.06G292500 0.5kb upstream 0.5kb upstream 500 false Chr06: 48142022-48142521 Glycine max
Glyma.06G292500 0.5kb downstream 0.5kb downstream 5459 true Chr06: 48136563-48142021 Glycine max
Glyma.06G292500 0.5kb downstream 0.5kb downstream 500 false Chr06: 48136563-48137062 Glycine max
Glyma.06G292500 1.0kb upstream 1.0kb upstream 5959 true Chr06: 48137063-48143021 Glycine max
Glyma.06G292500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48142022-48143021 Glycine max
Glyma.06G292500 1.0kb downstream 1.0kb downstream 5959 true Chr06: 48136063-48142021 Glycine max
Glyma.06G292500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48136063-48137062 Glycine max
Glyma.06G292500 2.0kb upstream 2.0kb upstream 6959 true Chr06: 48137063-48144021 Glycine max
Glyma.06G292500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48142022-48144021 Glycine max
Glyma.06G292500 2.0kb downstream 2.0kb downstream 6959 true Chr06: 48135063-48142021 Glycine max
Glyma.06G292500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48135063-48137062 Glycine max
Glyma.06G292500 5.0kb upstream 5.0kb upstream 9959 true Chr06: 48137063-48147021 Glycine max
Glyma.06G292500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48142022-48147021 Glycine max
Glyma.06G292500 5.0kb downstream 5.0kb downstream 9959 true Chr06: 48132063-48142021 Glycine max
Glyma.06G292500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48132063-48137062 Glycine max
Glyma.06G292500 10.0kb upstream 10.0kb upstream 14959 true Chr06: 48137063-48152021 Glycine max
Glyma.06G292500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48142022-48152021 Glycine max
Glyma.06G292500 10.0kb downstream 10.0kb downstream 14959 true Chr06: 48127063-48142021 Glycine max
Glyma.06G292500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48127063-48137062 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243643 5265 Fabidae Singleton cluster - no MSA
124051035 5270 Rosid View MSA
123749286 5271 Pentapetalae View MSA
122796440 5272 Eudicot View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.9905 0.0 53.4983    
cufflinks 11.0701 0.0 37.6547   Low
cufflinks 12.2335 0.0 42.0145    
cufflinks 16.4835 0.0 66.3088   High
cufflinks 11.6242 0.0 45.3862   Low
cufflinks 12.6159 0.0 43.7633    
cufflinks 13.9508 0.0 47.5378    
cufflinks 14.8047 0.0 58.9974    
cufflinks 13.461 0.0 53.3677    
cufflinks 7.325       High
cufflinks 5.983     High High
cufflinks 3.787        
cufflinks 3.298        
cufflinks 3.09       Low
cufflinks 4.021        
cufflinks 3.442        
cufflinks 7.858     High High
cufflinks 3.892        
cufflinks 3.811        
cufflinks 3.774        
cufflinks 3.596        
cufflinks 3.836        
cufflinks 4.485        
cufflinks 5.911       High
cufflinks 3.718        
cufflinks 4.458        

0 Strain