Gene : Glyma.06G293500 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR10794:SF38 - CAAX AMINO TERMINAL PROTEASE FAMILY PROTEIN Genomic Order:  2935
Name:  ? Glyma.06G293500 Secondary Identifier:  ? PAC:30551280
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G293500 0.5kb upstream 0.5kb upstream 4058 true Chr06: 48240760-48244817 Glycine max
Glyma.06G293500 0.5kb upstream 0.5kb upstream 500 false Chr06: 48244318-48244817 Glycine max
Glyma.06G293500 0.5kb downstream 0.5kb downstream 4058 true Chr06: 48240260-48244317 Glycine max
Glyma.06G293500 0.5kb downstream 0.5kb downstream 500 false Chr06: 48240260-48240759 Glycine max
Glyma.06G293500 1.0kb upstream 1.0kb upstream 4558 true Chr06: 48240760-48245317 Glycine max
Glyma.06G293500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48244318-48245317 Glycine max
Glyma.06G293500 1.0kb downstream 1.0kb downstream 4558 true Chr06: 48239760-48244317 Glycine max
Glyma.06G293500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48239760-48240759 Glycine max
Glyma.06G293500 2.0kb upstream 2.0kb upstream 5558 true Chr06: 48240760-48246317 Glycine max
Glyma.06G293500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48244318-48246317 Glycine max
Glyma.06G293500 2.0kb downstream 2.0kb downstream 5558 true Chr06: 48238760-48244317 Glycine max
Glyma.06G293500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48238760-48240759 Glycine max
Glyma.06G293500 5.0kb upstream 5.0kb upstream 8558 true Chr06: 48240760-48249317 Glycine max
Glyma.06G293500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48244318-48249317 Glycine max
Glyma.06G293500 5.0kb downstream 5.0kb downstream 8558 true Chr06: 48235760-48244317 Glycine max
Glyma.06G293500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48235760-48240759 Glycine max
Glyma.06G293500 10.0kb upstream 10.0kb upstream 13558 true Chr06: 48240760-48254317 Glycine max
Glyma.06G293500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48244318-48254317 Glycine max
Glyma.06G293500 10.0kb downstream 10.0kb downstream 13558 true Chr06: 48230760-48244317 Glycine max
Glyma.06G293500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48230760-48240759 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027170 5273 Angiosperm View MSA
122308239 5265 Fabidae View MSA
124061477 5270 Rosid View MSA
123739167 5271 Pentapetalae View MSA
122788246 5272 Eudicot View MSA
121344310 5274 Embryophyte View MSA
123428279 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.02191 0.0 32.7918   High
cufflinks 4.09393 0.0 18.9627    
cufflinks 4.36945 0.0 25.51    
cufflinks 4.21255 0.0 14.7804    
cufflinks 3.84612 0.0 14.1635    
cufflinks 6.7173 0.0 25.9282   High
cufflinks 4.81937 0.0 25.6613    
cufflinks 5.35167 0.0 28.3197    
cufflinks 4.57332 0.0 20.8779    
cufflinks 0.499        
cufflinks 0.244       Low
cufflinks 0.572        
cufflinks 0.533        
cufflinks 0.428        
cufflinks 0.238       Low
cufflinks 1.089       High
cufflinks 0.18       Low
cufflinks 0.545        
cufflinks 0.61        
cufflinks 1.514       High
cufflinks 0.346        
cufflinks 1.404       High
cufflinks 1.023        
cufflinks 0.324        
cufflinks 1.341       High
cufflinks 0.226       Low

0 Strain