Gene : PhHAL.1G102300 P. hallii HAL v2.1

Defline:  (1 of 1) PTHR12741:SF22 - CALLOSE SYNTHASE 8-RELATED Genomic Order:  994
Name:  ? PhHAL.1G102300 Secondary Identifier:  ? PAC:40417244

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL PWY-6773 Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.1G102300 0.5kb upstream 0.5kb upstream 25573 true Chr01: 7062696-7088268 Panicum hallii HAL
PhHAL.1G102300 0.5kb upstream 0.5kb upstream 500 false Chr01: 7062696-7063195 Panicum hallii HAL
PhHAL.1G102300 0.5kb downstream 0.5kb downstream 25573 true Chr01: 7063196-7088768 Panicum hallii HAL
PhHAL.1G102300 0.5kb downstream 0.5kb downstream 500 false Chr01: 7088269-7088768 Panicum hallii HAL
PhHAL.1G102300 1.0kb upstream 1.0kb upstream 26073 true Chr01: 7062196-7088268 Panicum hallii HAL
PhHAL.1G102300 1.0kb upstream 1.0kb upstream 1000 false Chr01: 7062196-7063195 Panicum hallii HAL
PhHAL.1G102300 1.0kb downstream 1.0kb downstream 26073 true Chr01: 7063196-7089268 Panicum hallii HAL
PhHAL.1G102300 1.0kb downstream 1.0kb downstream 1000 false Chr01: 7088269-7089268 Panicum hallii HAL
PhHAL.1G102300 2.0kb upstream 2.0kb upstream 27073 true Chr01: 7061196-7088268 Panicum hallii HAL
PhHAL.1G102300 2.0kb upstream 2.0kb upstream 2000 false Chr01: 7061196-7063195 Panicum hallii HAL
PhHAL.1G102300 2.0kb downstream 2.0kb downstream 27073 true Chr01: 7063196-7090268 Panicum hallii HAL
PhHAL.1G102300 2.0kb downstream 2.0kb downstream 2000 false Chr01: 7088269-7090268 Panicum hallii HAL
PhHAL.1G102300 5.0kb upstream 5.0kb upstream 30073 true Chr01: 7058196-7088268 Panicum hallii HAL
PhHAL.1G102300 5.0kb upstream 5.0kb upstream 5000 false Chr01: 7058196-7063195 Panicum hallii HAL
PhHAL.1G102300 5.0kb downstream 5.0kb downstream 30073 true Chr01: 7063196-7093268 Panicum hallii HAL
PhHAL.1G102300 5.0kb downstream 5.0kb downstream 5000 false Chr01: 7088269-7093268 Panicum hallii HAL
PhHAL.1G102300 10.0kb upstream 10.0kb upstream 35073 true Chr01: 7053196-7088268 Panicum hallii HAL
PhHAL.1G102300 10.0kb upstream 10.0kb upstream 10000 false Chr01: 7053196-7063195 Panicum hallii HAL
PhHAL.1G102300 10.0kb downstream 10.0kb downstream 35073 true Chr01: 7063196-7098268 Panicum hallii HAL
PhHAL.1G102300 10.0kb downstream 10.0kb downstream 10000 false Chr01: 7088269-7098268 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122191843 5267 Panicoideae View MSA
124589873 5269 Grass View MSA
122050431 5273 Angiosperm View MSA
121349066 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier