Gene : Glyma.06G296200 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  2962
Name:  ? Glyma.06G296200 Secondary Identifier:  ? PAC:30550318
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Ontology Annotation Displayer

0 Pathways

Genomics

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Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G296200 0.5kb upstream 0.5kb upstream 6253 true Chr06: 48520968-48527220 Glycine max
Glyma.06G296200 0.5kb upstream 0.5kb upstream 500 false Chr06: 48520968-48521467 Glycine max
Glyma.06G296200 0.5kb downstream 0.5kb downstream 6253 true Chr06: 48521468-48527720 Glycine max
Glyma.06G296200 0.5kb downstream 0.5kb downstream 500 false Chr06: 48527221-48527720 Glycine max
Glyma.06G296200 1.0kb upstream 1.0kb upstream 6753 true Chr06: 48520468-48527220 Glycine max
Glyma.06G296200 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48520468-48521467 Glycine max
Glyma.06G296200 1.0kb downstream 1.0kb downstream 6753 true Chr06: 48521468-48528220 Glycine max
Glyma.06G296200 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48527221-48528220 Glycine max
Glyma.06G296200 2.0kb upstream 2.0kb upstream 7753 true Chr06: 48519468-48527220 Glycine max
Glyma.06G296200 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48519468-48521467 Glycine max
Glyma.06G296200 2.0kb downstream 2.0kb downstream 7753 true Chr06: 48521468-48529220 Glycine max
Glyma.06G296200 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48527221-48529220 Glycine max
Glyma.06G296200 5.0kb upstream 5.0kb upstream 10753 true Chr06: 48516468-48527220 Glycine max
Glyma.06G296200 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48516468-48521467 Glycine max
Glyma.06G296200 5.0kb downstream 5.0kb downstream 10753 true Chr06: 48521468-48532220 Glycine max
Glyma.06G296200 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48527221-48532220 Glycine max
Glyma.06G296200 10.0kb upstream 10.0kb upstream 15753 true Chr06: 48511468-48527220 Glycine max
Glyma.06G296200 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48511468-48521467 Glycine max
Glyma.06G296200 10.0kb downstream 10.0kb downstream 15753 true Chr06: 48521468-48537220 Glycine max
Glyma.06G296200 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48527221-48537220 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
122299575 5265 Fabidae View MSA
124064580 5270 Rosid View MSA
123739469 5271 Pentapetalae View MSA
122786449 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4032 0.0 43.9002    
cufflinks 24.6145 0.0 98.0447 High  
cufflinks 6.1722 0.0 30.0687   Low
cufflinks 28.8101 0.0 142.153 High  
cufflinks 16.9163 0.0 73.9179    
cufflinks 13.3954 0.0 45.485    
cufflinks 26.8165 0.0 130.138 High  
cufflinks 39.2054 0.0 197.384 High High
cufflinks 18.118 0.0 77.4701    
cufflinks 3.015        
cufflinks 0.593       Low
cufflinks 1.853        
cufflinks 2.383        
cufflinks 2.79        
cufflinks 0.935        
cufflinks 2.958        
cufflinks 0.674       Low
cufflinks 2.178        
cufflinks 3.781       High
cufflinks 2.632        
cufflinks 0.733       Low
cufflinks 2.909        
cufflinks 2.889        
cufflinks 0.63       Low
cufflinks 2.49        
cufflinks 0.854       Low

0 Strain