Gene : Glyma.06G296500 G. max Wm82.a2.v1
Defline:  (1 of 4) PTHR31901:SF10 - AUXIN-RESPONSIVE GH3 FAMILY PROTEIN Genomic Order:  2965
Name:  ? Glyma.06G296500 Secondary Identifier:  ? PAC:30552614
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G296500 0.5kb upstream 0.5kb upstream 5745 true Chr06: 48551973-48557717 Glycine max
Glyma.06G296500 0.5kb upstream 0.5kb upstream 500 false Chr06: 48557218-48557717 Glycine max
Glyma.06G296500 0.5kb downstream 0.5kb downstream 5745 true Chr06: 48551473-48557217 Glycine max
Glyma.06G296500 0.5kb downstream 0.5kb downstream 500 false Chr06: 48551473-48551972 Glycine max
Glyma.06G296500 1.0kb upstream 1.0kb upstream 6245 true Chr06: 48551973-48558217 Glycine max
Glyma.06G296500 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48557218-48558217 Glycine max
Glyma.06G296500 1.0kb downstream 1.0kb downstream 6245 true Chr06: 48550973-48557217 Glycine max
Glyma.06G296500 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48550973-48551972 Glycine max
Glyma.06G296500 2.0kb upstream 2.0kb upstream 7245 true Chr06: 48551973-48559217 Glycine max
Glyma.06G296500 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48557218-48559217 Glycine max
Glyma.06G296500 2.0kb downstream 2.0kb downstream 7245 true Chr06: 48549973-48557217 Glycine max
Glyma.06G296500 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48549973-48551972 Glycine max
Glyma.06G296500 5.0kb upstream 5.0kb upstream 10245 true Chr06: 48551973-48562217 Glycine max
Glyma.06G296500 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48557218-48562217 Glycine max
Glyma.06G296500 5.0kb downstream 5.0kb downstream 10245 true Chr06: 48546973-48557217 Glycine max
Glyma.06G296500 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48546973-48551972 Glycine max
Glyma.06G296500 10.0kb upstream 10.0kb upstream 15245 true Chr06: 48551973-48567217 Glycine max
Glyma.06G296500 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48557218-48567217 Glycine max
Glyma.06G296500 10.0kb downstream 10.0kb downstream 15245 true Chr06: 48541973-48557217 Glycine max
Glyma.06G296500 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48541973-48551972 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301063 5265 Fabidae View MSA
124061485 5270 Rosid View MSA
123750974 5271 Pentapetalae View MSA
122788178 5272 Eudicot View MSA
122044155 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.19888 0.0 4.52964    
cufflinks 1.82557 0.0 12.6103    
cufflinks 1.86516 0.0 8.55151    
cufflinks 0.931286 0.0 3.72293    
cufflinks 0.0983497 0.0 0.385215 Low  
cufflinks 0.319259 0.0 2.00532    
cufflinks 0.00900666 0.0 0.046821 Low Low
cufflinks 1.21642 0.0 7.60015    
cufflinks 0.0521544 0.0 0.210711 Low Low
cufflinks 0.603        
cufflinks 0.039     Low  
cufflinks 0.575        
cufflinks 0.011     Low Low
cufflinks 0.001     Low Low
cufflinks 0.051     Low  
cufflinks 0.364        
cufflinks 0.012     Low Low
cufflinks 0.363        
cufflinks 0.285        
cufflinks 0.246        
cufflinks 0.04     Low  
cufflinks 0.43        
cufflinks 1.291       High
cufflinks 0.02     Low  
cufflinks 0.306        
cufflinks 0.052     Low  

0 Strain