Gene : Glyma.06G296800 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR27001:SF91 - PROTEIN STRUBBELIG-RELATED Genomic Order:  2968
Name:  ? Glyma.06G296800 Secondary Identifier:  ? PAC:30553425
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G296800 0.5kb upstream 0.5kb upstream 9545 true Chr06: 48598434-48607978 Glycine max
Glyma.06G296800 0.5kb upstream 0.5kb upstream 500 false Chr06: 48598434-48598933 Glycine max
Glyma.06G296800 0.5kb downstream 0.5kb downstream 9545 true Chr06: 48598934-48608478 Glycine max
Glyma.06G296800 0.5kb downstream 0.5kb downstream 500 false Chr06: 48607979-48608478 Glycine max
Glyma.06G296800 1.0kb upstream 1.0kb upstream 10045 true Chr06: 48597934-48607978 Glycine max
Glyma.06G296800 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48597934-48598933 Glycine max
Glyma.06G296800 1.0kb downstream 1.0kb downstream 10045 true Chr06: 48598934-48608978 Glycine max
Glyma.06G296800 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48607979-48608978 Glycine max
Glyma.06G296800 2.0kb upstream 2.0kb upstream 11045 true Chr06: 48596934-48607978 Glycine max
Glyma.06G296800 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48596934-48598933 Glycine max
Glyma.06G296800 2.0kb downstream 2.0kb downstream 11045 true Chr06: 48598934-48609978 Glycine max
Glyma.06G296800 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48607979-48609978 Glycine max
Glyma.06G296800 5.0kb upstream 5.0kb upstream 14045 true Chr06: 48593934-48607978 Glycine max
Glyma.06G296800 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48593934-48598933 Glycine max
Glyma.06G296800 5.0kb downstream 5.0kb downstream 14045 true Chr06: 48598934-48612978 Glycine max
Glyma.06G296800 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48607979-48612978 Glycine max
Glyma.06G296800 10.0kb upstream 10.0kb upstream 19045 true Chr06: 48588934-48607978 Glycine max
Glyma.06G296800 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48588934-48598933 Glycine max
Glyma.06G296800 10.0kb downstream 10.0kb downstream 19045 true Chr06: 48598934-48617978 Glycine max
Glyma.06G296800 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48607979-48617978 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122243547 5265 Fabidae Singleton cluster - no MSA
124064785 5270 Rosid View MSA
123746187 5271 Pentapetalae View MSA
122786537 5272 Eudicot View MSA
122051467 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121348233 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.27484 0.0 19.1402    
cufflinks 11.8102 0.0 41.2376    
cufflinks 16.3972 0.0 50.1656   High
cufflinks 4.22217 0.0 16.1901   Low
cufflinks 11.7156 0.0 40.9069    
cufflinks 4.50884 0.0 17.1366   Low
cufflinks 5.85396 0.0 20.4787    
cufflinks 14.6586 0.0 50.5098    
cufflinks 13.2744 0.0 45.7056    
cufflinks 2.969        
cufflinks 8.84     High High
cufflinks 2.054        
cufflinks 1.736        
cufflinks 2.217        
cufflinks 29.853     High High
cufflinks 2.932        
cufflinks 0.776       Low
cufflinks 2.252        
cufflinks 2.487        
cufflinks 3.481        
cufflinks 5.782     High  
cufflinks 2.566        
cufflinks 2.251        
cufflinks 4.38        
cufflinks 3.243        
cufflinks 1.436        

0 Strain