Gene : Glyma.06G297000 G. max Wm82.a2.v1
Defline:  (1 of 4) PF04410 - Gar1/Naf1 RNA binding region (Gar1) Genomic Order:  2970
Name:  ? Glyma.06G297000 Secondary Identifier:  ? PAC:30552081
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G297000 0.5kb upstream 0.5kb upstream 3169 true Chr06: 48622364-48625532 Glycine max
Glyma.06G297000 0.5kb upstream 0.5kb upstream 500 false Chr06: 48622364-48622863 Glycine max
Glyma.06G297000 0.5kb downstream 0.5kb downstream 3169 true Chr06: 48622864-48626032 Glycine max
Glyma.06G297000 0.5kb downstream 0.5kb downstream 500 false Chr06: 48625533-48626032 Glycine max
Glyma.06G297000 1.0kb upstream 1.0kb upstream 3669 true Chr06: 48621864-48625532 Glycine max
Glyma.06G297000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48621864-48622863 Glycine max
Glyma.06G297000 1.0kb downstream 1.0kb downstream 3669 true Chr06: 48622864-48626532 Glycine max
Glyma.06G297000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48625533-48626532 Glycine max
Glyma.06G297000 2.0kb upstream 2.0kb upstream 4669 true Chr06: 48620864-48625532 Glycine max
Glyma.06G297000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48620864-48622863 Glycine max
Glyma.06G297000 2.0kb downstream 2.0kb downstream 4669 true Chr06: 48622864-48627532 Glycine max
Glyma.06G297000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48625533-48627532 Glycine max
Glyma.06G297000 5.0kb upstream 5.0kb upstream 7669 true Chr06: 48617864-48625532 Glycine max
Glyma.06G297000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48617864-48622863 Glycine max
Glyma.06G297000 5.0kb downstream 5.0kb downstream 7669 true Chr06: 48622864-48630532 Glycine max
Glyma.06G297000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48625533-48630532 Glycine max
Glyma.06G297000 10.0kb upstream 10.0kb upstream 12669 true Chr06: 48612864-48625532 Glycine max
Glyma.06G297000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48612864-48622863 Glycine max
Glyma.06G297000 10.0kb downstream 10.0kb downstream 12669 true Chr06: 48622864-48635532 Glycine max
Glyma.06G297000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48625533-48635532 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041036 5273 Angiosperm View MSA
122243719 5265 Fabidae Singleton cluster - no MSA
124040177 5270 Rosid View MSA
123746164 5271 Pentapetalae View MSA
122790588 5272 Eudicot View MSA
121343792 5274 Embryophyte View MSA
123424387 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.5294 0.0 17.9329   High
cufflinks 4.59401 0.0 13.0607    
cufflinks 2.1522 0.0 6.76189   Low
cufflinks 2.94476 0.0 8.83555    
cufflinks 5.27996 0.0 14.7737    
cufflinks 2.95874 0.0 8.88055    
cufflinks 4.0523 0.0 11.6879    
cufflinks 4.62843 0.0 13.1184    
cufflinks 4.70826 0.0 13.3403    
cufflinks 1.721        
cufflinks 1.204        
cufflinks 2.696        
cufflinks 5.522       High
cufflinks 7.072     High High
cufflinks 1.322        
cufflinks 1.614        
cufflinks 4.383       High
cufflinks 2.124        
cufflinks 4.397       High
cufflinks 1.18        
cufflinks 0.699       Low
cufflinks 1.67        
cufflinks 3.168        
cufflinks 0.965       Low
cufflinks 1.387        
cufflinks 2.07        

0 Strain