Gene : Glyma.06G297100 G. max Wm82.a2.v1
Defline:  (1 of 21) PTHR34053:SF1 - PROTEIN ULTRAPETALA 1-RELATED Genomic Order:  2971
Name:  ? Glyma.06G297100 Secondary Identifier:  ? PAC:30550574
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G297100 0.5kb upstream 0.5kb upstream 5103 true Chr06: 48627479-48632581 Glycine max
Glyma.06G297100 0.5kb upstream 0.5kb upstream 500 false Chr06: 48632082-48632581 Glycine max
Glyma.06G297100 0.5kb downstream 0.5kb downstream 5103 true Chr06: 48626979-48632081 Glycine max
Glyma.06G297100 0.5kb downstream 0.5kb downstream 500 false Chr06: 48626979-48627478 Glycine max
Glyma.06G297100 1.0kb upstream 1.0kb upstream 5603 true Chr06: 48627479-48633081 Glycine max
Glyma.06G297100 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48632082-48633081 Glycine max
Glyma.06G297100 1.0kb downstream 1.0kb downstream 5603 true Chr06: 48626479-48632081 Glycine max
Glyma.06G297100 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48626479-48627478 Glycine max
Glyma.06G297100 2.0kb upstream 2.0kb upstream 6603 true Chr06: 48627479-48634081 Glycine max
Glyma.06G297100 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48632082-48634081 Glycine max
Glyma.06G297100 2.0kb downstream 2.0kb downstream 6603 true Chr06: 48625479-48632081 Glycine max
Glyma.06G297100 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48625479-48627478 Glycine max
Glyma.06G297100 5.0kb upstream 5.0kb upstream 9603 true Chr06: 48627479-48637081 Glycine max
Glyma.06G297100 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48632082-48637081 Glycine max
Glyma.06G297100 5.0kb downstream 5.0kb downstream 9603 true Chr06: 48622479-48632081 Glycine max
Glyma.06G297100 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48622479-48627478 Glycine max
Glyma.06G297100 10.0kb upstream 10.0kb upstream 14603 true Chr06: 48627479-48642081 Glycine max
Glyma.06G297100 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48632082-48642081 Glycine max
Glyma.06G297100 10.0kb downstream 10.0kb downstream 14603 true Chr06: 48617479-48632081 Glycine max
Glyma.06G297100 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48617479-48627478 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299051 5265 Fabidae View MSA
124065655 5270 Rosid View MSA
123743766 5271 Pentapetalae View MSA
122795769 5272 Eudicot View MSA
122043441 5273 Angiosperm View MSA
121310126 5274 Embryophyte View MSA
123347700 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.1242 0.0 40.9524    
cufflinks 14.9944 0.0 40.6236    
cufflinks 11.287 0.0 31.1955    
cufflinks 6.62099 0.0 19.394   Low
cufflinks 20.3721 0.0 54.5118 High  
cufflinks 46.3945 0.0 125.967 High High
cufflinks 30.2508 0.0 80.8025 High  
cufflinks 17.8304 0.0 47.8926    
cufflinks 19.3694 0.0 51.8799    
cufflinks 4.889        
cufflinks 8.304     High High
cufflinks 3.197        
cufflinks 4.855        
cufflinks 5.389        
cufflinks 5.281     High  
cufflinks 4.376        
cufflinks 4.556        
cufflinks 2.15       Low
cufflinks 3.571        
cufflinks 3.89        
cufflinks 7.213     High High
cufflinks 3.417        
cufflinks 2.367       Low
cufflinks 8.897     High High
cufflinks 3.428        
cufflinks 4.501        

0 Strain