Gene : Glyma.06G300600 G. max Wm82.a2.v1
Defline:  (1 of 7) PF00069//PF00954//PF01453//PF08276 - Protein kinase domain (Pkinase) // S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // PAN-like domain (PAN_2) Genomic Order:  3006
Name:  ? Glyma.06G300600 Secondary Identifier:  ? PAC:30551895
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Ontology Annotation Displayer

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Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G300600 0.5kb upstream 0.5kb upstream 3658 true Chr06: 48955701-48959358 Glycine max
Glyma.06G300600 0.5kb upstream 0.5kb upstream 500 false Chr06: 48958859-48959358 Glycine max
Glyma.06G300600 0.5kb downstream 0.5kb downstream 3658 true Chr06: 48955201-48958858 Glycine max
Glyma.06G300600 0.5kb downstream 0.5kb downstream 500 false Chr06: 48955201-48955700 Glycine max
Glyma.06G300600 1.0kb upstream 1.0kb upstream 4158 true Chr06: 48955701-48959858 Glycine max
Glyma.06G300600 1.0kb upstream 1.0kb upstream 1000 false Chr06: 48958859-48959858 Glycine max
Glyma.06G300600 1.0kb downstream 1.0kb downstream 4158 true Chr06: 48954701-48958858 Glycine max
Glyma.06G300600 1.0kb downstream 1.0kb downstream 1000 false Chr06: 48954701-48955700 Glycine max
Glyma.06G300600 2.0kb upstream 2.0kb upstream 5158 true Chr06: 48955701-48960858 Glycine max
Glyma.06G300600 2.0kb upstream 2.0kb upstream 2000 false Chr06: 48958859-48960858 Glycine max
Glyma.06G300600 2.0kb downstream 2.0kb downstream 5158 true Chr06: 48953701-48958858 Glycine max
Glyma.06G300600 2.0kb downstream 2.0kb downstream 2000 false Chr06: 48953701-48955700 Glycine max
Glyma.06G300600 5.0kb upstream 5.0kb upstream 8158 true Chr06: 48955701-48963858 Glycine max
Glyma.06G300600 5.0kb upstream 5.0kb upstream 5000 false Chr06: 48958859-48963858 Glycine max
Glyma.06G300600 5.0kb downstream 5.0kb downstream 8158 true Chr06: 48950701-48958858 Glycine max
Glyma.06G300600 5.0kb downstream 5.0kb downstream 5000 false Chr06: 48950701-48955700 Glycine max
Glyma.06G300600 10.0kb upstream 10.0kb upstream 13158 true Chr06: 48955701-48968858 Glycine max
Glyma.06G300600 10.0kb upstream 10.0kb upstream 10000 false Chr06: 48958859-48968858 Glycine max
Glyma.06G300600 10.0kb downstream 10.0kb downstream 13158 true Chr06: 48945701-48958858 Glycine max
Glyma.06G300600 10.0kb downstream 10.0kb downstream 10000 false Chr06: 48945701-48955700 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310372 5265 Fabidae View MSA
124073959 5270 Rosid View MSA
123747551 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.87205 0.0 21.0543   High
cufflinks 2.46885 0.0 7.24341    
cufflinks 7.11063 0.0 19.0503   High
cufflinks 3.95093 0.0 10.9743    
cufflinks 2.39737 0.0 7.06747    
cufflinks 6.18065 0.0 16.6664    
cufflinks 1.80832 0.0 5.53805   Low
cufflinks 3.7345 0.0 10.4253    
cufflinks 2.85428 0.0 8.21936    
cufflinks 2.383        
cufflinks 2.854        
cufflinks 6.79       High
cufflinks 2.392        
cufflinks 0.838       Low
cufflinks 0.304       Low
cufflinks 2.265        
cufflinks 6.909     High High
cufflinks 4.546        
cufflinks 3.932        
cufflinks 2.115        
cufflinks 1.617        
cufflinks 3.363        
cufflinks 3.37        
cufflinks 5.082        
cufflinks 2.26        
cufflinks 3.128        

0 Strain