Gene : Glyma.06G284900 G. max Wm82.a2.v1
Defline:  (1 of 6) PTHR13301:SF69 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  2849
Name:  ? Glyma.06G284900 Secondary Identifier:  ? PAC:30553782
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G284900 0.5kb upstream 0.5kb upstream 4194 true Chr06: 47339957-47344150 Glycine max
Glyma.06G284900 0.5kb upstream 0.5kb upstream 500 false Chr06: 47343651-47344150 Glycine max
Glyma.06G284900 0.5kb downstream 0.5kb downstream 4194 true Chr06: 47339457-47343650 Glycine max
Glyma.06G284900 0.5kb downstream 0.5kb downstream 500 false Chr06: 47339457-47339956 Glycine max
Glyma.06G284900 1.0kb upstream 1.0kb upstream 4694 true Chr06: 47339957-47344650 Glycine max
Glyma.06G284900 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47343651-47344650 Glycine max
Glyma.06G284900 1.0kb downstream 1.0kb downstream 4694 true Chr06: 47338957-47343650 Glycine max
Glyma.06G284900 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47338957-47339956 Glycine max
Glyma.06G284900 2.0kb upstream 2.0kb upstream 5694 true Chr06: 47339957-47345650 Glycine max
Glyma.06G284900 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47343651-47345650 Glycine max
Glyma.06G284900 2.0kb downstream 2.0kb downstream 5694 true Chr06: 47337957-47343650 Glycine max
Glyma.06G284900 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47337957-47339956 Glycine max
Glyma.06G284900 5.0kb upstream 5.0kb upstream 8694 true Chr06: 47339957-47348650 Glycine max
Glyma.06G284900 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47343651-47348650 Glycine max
Glyma.06G284900 5.0kb downstream 5.0kb downstream 8694 true Chr06: 47334957-47343650 Glycine max
Glyma.06G284900 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47334957-47339956 Glycine max
Glyma.06G284900 10.0kb upstream 10.0kb upstream 13694 true Chr06: 47339957-47353650 Glycine max
Glyma.06G284900 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47343651-47353650 Glycine max
Glyma.06G284900 10.0kb downstream 10.0kb downstream 13694 true Chr06: 47329957-47343650 Glycine max
Glyma.06G284900 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47329957-47339956 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312955 5265 Fabidae View MSA
124069562 5270 Rosid View MSA
123743912 5271 Pentapetalae View MSA
122795222 5272 Eudicot View MSA
122050471 5273 Angiosperm View MSA
123428913 5275 Viridiplantae View MSA
121350837 5274 Embryophyte View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.863871 0.0 3.04437   Low
cufflinks 15.9832 0.0 42.6586   High
cufflinks 1.61998 0.0 5.31839    
cufflinks 1.54525 0.0 5.102    
cufflinks 9.66594 0.0 26.0338    
cufflinks 11.425 0.0 30.5852   High
cufflinks 0.49965 0.0 1.82786   Low
cufflinks 2.94452 0.0 8.89666    
cufflinks 5.57313 0.0 15.5902    
cufflinks 24.583     High  
cufflinks 0.547       Low
cufflinks 3.541        
cufflinks 6.627        
cufflinks 9.904     High  
cufflinks 0.13       Low
cufflinks 28.703     High  
cufflinks 3.601        
cufflinks 13.122     High  
cufflinks 7.849     High  
cufflinks 32.34     High High
cufflinks 0.385       Low
cufflinks 30.382     High  
cufflinks 21.165     High  
cufflinks 0.223       Low
cufflinks 32.488     High High
cufflinks 2.133        

0 Strain