Gene : Glyma.06G285000 G. max Wm82.a2.v1
Defline:  (1 of 2) PTHR12630:SF7 - EXPRESSED PROTEIN Genomic Order:  2850
Name:  ? Glyma.06G285000 Secondary Identifier:  ? PAC:30552725
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Glyma.06G285000 0.5kb upstream 0.5kb upstream 13660 true Chr06: 47349868-47363527 Glycine max
Glyma.06G285000 0.5kb upstream 0.5kb upstream 500 false Chr06: 47363028-47363527 Glycine max
Glyma.06G285000 0.5kb downstream 0.5kb downstream 13660 true Chr06: 47349368-47363027 Glycine max
Glyma.06G285000 0.5kb downstream 0.5kb downstream 500 false Chr06: 47349368-47349867 Glycine max
Glyma.06G285000 1.0kb upstream 1.0kb upstream 14160 true Chr06: 47349868-47364027 Glycine max
Glyma.06G285000 1.0kb upstream 1.0kb upstream 1000 false Chr06: 47363028-47364027 Glycine max
Glyma.06G285000 1.0kb downstream 1.0kb downstream 14160 true Chr06: 47348868-47363027 Glycine max
Glyma.06G285000 1.0kb downstream 1.0kb downstream 1000 false Chr06: 47348868-47349867 Glycine max
Glyma.06G285000 2.0kb upstream 2.0kb upstream 15160 true Chr06: 47349868-47365027 Glycine max
Glyma.06G285000 2.0kb upstream 2.0kb upstream 2000 false Chr06: 47363028-47365027 Glycine max
Glyma.06G285000 2.0kb downstream 2.0kb downstream 15160 true Chr06: 47347868-47363027 Glycine max
Glyma.06G285000 2.0kb downstream 2.0kb downstream 2000 false Chr06: 47347868-47349867 Glycine max
Glyma.06G285000 5.0kb upstream 5.0kb upstream 18160 true Chr06: 47349868-47368027 Glycine max
Glyma.06G285000 5.0kb upstream 5.0kb upstream 5000 false Chr06: 47363028-47368027 Glycine max
Glyma.06G285000 5.0kb downstream 5.0kb downstream 18160 true Chr06: 47344868-47363027 Glycine max
Glyma.06G285000 5.0kb downstream 5.0kb downstream 5000 false Chr06: 47344868-47349867 Glycine max
Glyma.06G285000 10.0kb upstream 10.0kb upstream 23160 true Chr06: 47349868-47373027 Glycine max
Glyma.06G285000 10.0kb upstream 10.0kb upstream 10000 false Chr06: 47363028-47373027 Glycine max
Glyma.06G285000 10.0kb downstream 10.0kb downstream 23160 true Chr06: 47339868-47363027 Glycine max
Glyma.06G285000 10.0kb downstream 10.0kb downstream 10000 false Chr06: 47339868-47349867 Glycine max

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122308686 5265 Fabidae View MSA
124061197 5270 Rosid View MSA
123748713 5271 Pentapetalae View MSA
122792697 5272 Eudicot View MSA
122047076 5273 Angiosperm View MSA
121346791 5274 Embryophyte View MSA
123380446 5275 Viridiplantae View MSA

26 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.65038 0.0 37.1944   High
cufflinks 3.98698 0.0 27.0448    
cufflinks 4.13764 0.0 17.3264    
cufflinks 4.01206 0.0 30.2721    
cufflinks 2.86185 0.0 13.8554   Low
cufflinks 5.10607 0.0 23.7113    
cufflinks 3.8118 0.0 23.2492    
cufflinks 4.10456 0.0 37.6146    
cufflinks 3.2846 0.0 21.8324    
cufflinks 0.084     Low  
cufflinks 0.046     Low Low
cufflinks 0.077     Low  
cufflinks 0.069     Low  
cufflinks 0.076        
cufflinks 0.051     Low  
cufflinks 0.099     Low High
cufflinks 0.035     Low Low
cufflinks 0.078     Low  
cufflinks 0.087     Low  
cufflinks 0.089     Low  
cufflinks 0.054     Low  
cufflinks 0.119       High
cufflinks 0.091     Low  
cufflinks 0.082        
cufflinks 0.081     Low  
cufflinks 0.039     Low Low

0 Strain