Gene : PhHAL.1G027100 P. hallii HAL v2.1

Defline:  (1 of 20) PF01535//PF13812 - PPR repeat (PPR) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  263
Name:  ? PhHAL.1G027100 Secondary Identifier:  ? PAC:40413126

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.1G027100 0.5kb upstream 0.5kb upstream 8296 true Chr01: 1626602-1634897 Panicum hallii HAL
PhHAL.1G027100 0.5kb upstream 0.5kb upstream 500 false Chr01: 1634398-1634897 Panicum hallii HAL
PhHAL.1G027100 0.5kb downstream 0.5kb downstream 8296 true Chr01: 1626102-1634397 Panicum hallii HAL
PhHAL.1G027100 0.5kb downstream 0.5kb downstream 500 false Chr01: 1626102-1626601 Panicum hallii HAL
PhHAL.1G027100 1.0kb upstream 1.0kb upstream 8796 true Chr01: 1626602-1635397 Panicum hallii HAL
PhHAL.1G027100 1.0kb upstream 1.0kb upstream 1000 false Chr01: 1634398-1635397 Panicum hallii HAL
PhHAL.1G027100 1.0kb downstream 1.0kb downstream 8796 true Chr01: 1625602-1634397 Panicum hallii HAL
PhHAL.1G027100 1.0kb downstream 1.0kb downstream 1000 false Chr01: 1625602-1626601 Panicum hallii HAL
PhHAL.1G027100 2.0kb upstream 2.0kb upstream 9796 true Chr01: 1626602-1636397 Panicum hallii HAL
PhHAL.1G027100 2.0kb upstream 2.0kb upstream 2000 false Chr01: 1634398-1636397 Panicum hallii HAL
PhHAL.1G027100 2.0kb downstream 2.0kb downstream 9796 true Chr01: 1624602-1634397 Panicum hallii HAL
PhHAL.1G027100 2.0kb downstream 2.0kb downstream 2000 false Chr01: 1624602-1626601 Panicum hallii HAL
PhHAL.1G027100 5.0kb upstream 5.0kb upstream 12796 true Chr01: 1626602-1639397 Panicum hallii HAL
PhHAL.1G027100 5.0kb upstream 5.0kb upstream 5000 false Chr01: 1634398-1639397 Panicum hallii HAL
PhHAL.1G027100 5.0kb downstream 5.0kb downstream 12796 true Chr01: 1621602-1634397 Panicum hallii HAL
PhHAL.1G027100 5.0kb downstream 5.0kb downstream 5000 false Chr01: 1621602-1626601 Panicum hallii HAL
PhHAL.1G027100 10.0kb upstream 10.0kb upstream 17796 true Chr01: 1626602-1644397 Panicum hallii HAL
PhHAL.1G027100 10.0kb upstream 10.0kb upstream 10000 false Chr01: 1634398-1644397 Panicum hallii HAL
PhHAL.1G027100 10.0kb downstream 10.0kb downstream 17796 true Chr01: 1616602-1634397 Panicum hallii HAL
PhHAL.1G027100 10.0kb downstream 10.0kb downstream 10000 false Chr01: 1616602-1626601 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179951 5267 Panicoideae View MSA
124579395 5269 Grass View MSA
122045808 5273 Angiosperm View MSA
121347981 5274 Embryophyte View MSA
123380700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier