Gene : PhHAL.1G051500 P. hallii HAL v2.1

Defline:  (1 of 2) PTHR10836//PTHR10836:SF46 - GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE // SUBFAMILY NOT NAMED Genomic Order:  504
Name:  ? PhHAL.1G051500 Secondary Identifier:  ? PAC:40413626

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
PhalliiHAL ANAEROFRUCAT-PWY Panicum hallii HAL pathologic  
PhalliiHAL ANAGLYCOLYSIS-PWY Panicum hallii HAL pathologic  
PhalliiHAL GLUCONEO-PWY Panicum hallii HAL pathologic  
PhalliiHAL PWY-1042 Panicum hallii HAL pathologic  
PhalliiHAL PWY-5464 Panicum hallii HAL pathologic  
PhalliiHAL SUCSYN-PWY Panicum hallii HAL pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
PhHAL.1G051500 0.5kb upstream 0.5kb upstream 5890 true Chr01: 3061218-3067107 Panicum hallii HAL
PhHAL.1G051500 0.5kb upstream 0.5kb upstream 500 false Chr01: 3061218-3061717 Panicum hallii HAL
PhHAL.1G051500 0.5kb downstream 0.5kb downstream 5890 true Chr01: 3061718-3067607 Panicum hallii HAL
PhHAL.1G051500 0.5kb downstream 0.5kb downstream 500 false Chr01: 3067108-3067607 Panicum hallii HAL
PhHAL.1G051500 1.0kb upstream 1.0kb upstream 6390 true Chr01: 3060718-3067107 Panicum hallii HAL
PhHAL.1G051500 1.0kb upstream 1.0kb upstream 1000 false Chr01: 3060718-3061717 Panicum hallii HAL
PhHAL.1G051500 1.0kb downstream 1.0kb downstream 6390 true Chr01: 3061718-3068107 Panicum hallii HAL
PhHAL.1G051500 1.0kb downstream 1.0kb downstream 1000 false Chr01: 3067108-3068107 Panicum hallii HAL
PhHAL.1G051500 2.0kb upstream 2.0kb upstream 7390 true Chr01: 3059718-3067107 Panicum hallii HAL
PhHAL.1G051500 2.0kb upstream 2.0kb upstream 2000 false Chr01: 3059718-3061717 Panicum hallii HAL
PhHAL.1G051500 2.0kb downstream 2.0kb downstream 7390 true Chr01: 3061718-3069107 Panicum hallii HAL
PhHAL.1G051500 2.0kb downstream 2.0kb downstream 2000 false Chr01: 3067108-3069107 Panicum hallii HAL
PhHAL.1G051500 5.0kb upstream 5.0kb upstream 10390 true Chr01: 3056718-3067107 Panicum hallii HAL
PhHAL.1G051500 5.0kb upstream 5.0kb upstream 5000 false Chr01: 3056718-3061717 Panicum hallii HAL
PhHAL.1G051500 5.0kb downstream 5.0kb downstream 10390 true Chr01: 3061718-3072107 Panicum hallii HAL
PhHAL.1G051500 5.0kb downstream 5.0kb downstream 5000 false Chr01: 3067108-3072107 Panicum hallii HAL
PhHAL.1G051500 10.0kb upstream 10.0kb upstream 15390 true Chr01: 3051718-3067107 Panicum hallii HAL
PhHAL.1G051500 10.0kb upstream 10.0kb upstream 10000 false Chr01: 3051718-3061717 Panicum hallii HAL
PhHAL.1G051500 10.0kb downstream 10.0kb downstream 15390 true Chr01: 3061718-3077107 Panicum hallii HAL
PhHAL.1G051500 10.0kb downstream 10.0kb downstream 10000 false Chr01: 3067108-3077107 Panicum hallii HAL

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175260 5267 Panicoideae View MSA
124572618 5269 Grass View MSA
122042179 5273 Angiosperm View MSA
121345581 5274 Embryophyte View MSA
123425180 5275 Viridiplantae View MSA

0 Rna Seq Expressions

1 Strain

DB identifier